DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KLHL18 and klhl24a

DIOPT Version :9

Sequence 1:NP_001262494.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_001070808.1 Gene:klhl24a / 768198 ZFINID:ZDB-GENE-061013-572 Length:599 Species:Danio rerio


Alignment Length:549 Identity:182/549 - (33%)
Similarity:279/549 - (50%) Gaps:24/549 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LFKEIRRMGKLCDVTLKVEDQTFSAHRVVLAATIPYFYAMFTNNMAESRIKEITMKESAIEPSAL 92
            :|.|.|......||.:.|:.:.|..||.||:|...||.|||.|:..|||  |:.::.:.|:..|:
Zfish    54 VFNEFRDSRLFTDVIISVQGREFPCHRAVLSACSSYFRAMFCNDHRESR--EMVVEINGIQADAM 116

  Fly    93 ESLINYVYSGQVRIDNQNVQNLMVGASFLQLSNVRDACASFLISRFHPHNVLGIRTFADSMICRQ 157
            ::.:.|||:|:..|...|||.|...:|..|::.:|||||.||..:..|.|.|||:.|||:...:|
Zfish   117 DTFLQYVYTGRACITTLNVQFLFETSSLFQITTLRDACAKFLEEQLDPCNCLGIQRFADAHSLKQ 181

  Fly   158 LIDAADKYIDQNFAKVSQSEEFLALDCEQLLELMRRDELNVRTEEVIFEACMKWVKYAEDKRSEL 222
            |......:...||.:|:|.|||..|..::|.|.:..|||::..|||:|||.|:||.:..:.|..:
Zfish   182 LASRCRTFALLNFPEVAQHEEFQDLRKDELEEYLASDELSICREEVVFEAVMRWVYHGVEYRRPM 246

  Fly   223 FPQVLAAVRLPLLSPQFLADRVAREELIRSSHQCRDLLDEAKDFHLMPERRGLLQSFRTRQRSGE 287
            ...:|..||||||.|.:....|..::||:::.:|..||.||:.:|::...   :.|.|||.|...
Zfish   247 LKDLLQHVRLPLLHPNYFVQTVEGDKLIQNAPECYQLLHEARRYHVLGNE---MMSPRTRPRRST 308

  Fly   288 FFTGQIYAVGGLASTGE-SVSTVEIYDPLTKKW-KMGEQMSMMRSRVGVAVLNGKLYAFGG-FNG 349
            .|:..|..|||....|. ::...|.|||:|.:| .:.:.....:|...|..|...:...|| .|.
Zfish   309 GFSEVIVVVGGCERMGGFNLPYTECYDPVTGEWTSLAKHPEYTKSEYAVCALRNDIILSGGRINS 373

  Fly   350 TERLSTVEVYDPRKNKWSQGCAMLCKRSAVGVAALDDCIYVCGGYDGVTSLNTVEVYYPKSNTWK 414
                |.|.:|:.:.|.|.:..::...|....:..|...:|..|||||...||.||||...||.|.
Zfish   374 ----SYVWMYNSQLNVWIRVASLNKGRWRHKMTVLLGKVYAVGGYDGQCYLNNVEVYDSFSNRWT 434

  Fly   415 TVAQMMKYRSAGGVTQLNGYVYALGGH-DGLSIFDSVERYDQAEDVWVKMSPMLNRRCRLGVATL 478
            .||.:.:...:..||...|.::.:||. |..|..:.|:.||...|.|...:.:...:..:...:|
Zfish   435 EVAPLKEAVCSPAVTSCAGKLFVIGGEPDENSCSNKVQCYDPESDSWQLKACLPFTKPNISAVSL 499

  Fly   479 NGKIYVCGGYCGNSFLRSVECYDPQTDTWKLVTPMNCKRSRVALAANMGKLWAIG--GYDGESNL 541
            |..||||||     ..:|:.||||..|.|..|.....::....::...||::.:|  |.:||:: 
Zfish   500 NHLIYVCGG-----LTKSIYCYDPSQDHWMHVGHTFSRQESCGVSVCNGKIYILGGRGENGEAS- 558

  Fly   542 STVEVYDPETDKWT---FMPPMCAHSGGV 567
            :.|..|||.:...|   .||...::.|.|
Zfish   559 NNVVCYDPSSGIITSTAAMPRPVSYHGCV 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_001262494.1 BTB 29..135 CDD:279045 41/105 (39%)
PHA03098 36..510 CDD:222983 163/477 (34%)
BACK 143..245 CDD:285009 39/101 (39%)
Kelch 292..339 CDD:128874 14/48 (29%)
KELCH repeat 329..372 CDD:276965 11/43 (26%)
Kelch 340..386 CDD:128874 10/46 (22%)
KELCH repeat 376..417 CDD:276965 17/40 (43%)
Kelch 387..433 CDD:128874 19/45 (42%)
KELCH repeat 423..466 CDD:276965 12/43 (28%)
Kelch 435..480 CDD:128874 10/45 (22%)
Kelch_1 469..514 CDD:279660 16/44 (36%)
KELCH repeat 470..514 CDD:276965 16/43 (37%)
Kelch_1 517..560 CDD:279660 13/47 (28%)
KELCH repeat 517..560 CDD:276965 13/47 (28%)
klhl24aNP_001070808.1 BTB 55..158 CDD:279045 40/104 (38%)
PHA03098 67..550 CDD:222983 165/496 (33%)
BACK 167..269 CDD:285009 39/101 (39%)
Kelch 313..362 CDD:128874 14/48 (29%)
KELCH repeat 353..392 CDD:276965 11/42 (26%)
Kelch 364..406 CDD:128874 10/45 (22%)
KELCH repeat 396..440 CDD:276965 19/43 (44%)
Kelch 407..453 CDD:128874 19/45 (42%)
KELCH repeat 443..488 CDD:276965 12/44 (27%)
Kelch_1 444..488 CDD:279660 12/43 (28%)
KELCH repeat 491..527 CDD:276965 15/40 (38%)
Kelch_1 493..526 CDD:279660 15/37 (41%)
KELCH repeat 535..577 CDD:276965 11/42 (26%)
Kelch 544..590 CDD:128874 14/45 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4441
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X9
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.810

Return to query results.
Submit another query.