DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KLHL18 and Klhl24

DIOPT Version :9

Sequence 1:NP_001262494.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_083712.4 Gene:Klhl24 / 75785 MGIID:1923035 Length:600 Species:Mus musculus


Alignment Length:578 Identity:195/578 - (33%)
Similarity:298/578 - (51%) Gaps:29/578 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DLSDNSQVEDQYFVYKHDKLFGES-FPLFKEIRRMGKLCDVTLKVEDQTFSAHRVVLAATIPYFY 65
            ::...|....:||.:.......|: ..:|.|.|......||.:.||.:.|..||.||:|...||.
Mouse    28 EMDPKSLTGHEYFDFSSGSSHAENILQIFNEFRDSRLFTDVIICVEGKEFPCHRAVLSACSSYFR 92

  Fly    66 AMFTNNMAESRIKEITMKESAIEPSALESLINYVYSGQVRIDNQNVQNLMVGASFLQLSNVRDAC 130
            |||.|:..|||  |:.::.:.|...|:|..:.|||:|:|:|..:|||.|...:|..|:|.:||||
Mouse    93 AMFCNDHRESR--EMLVEINGILAEAMECFLQYVYTGKVKITTENVQYLFETSSLFQISVLRDAC 155

  Fly   131 ASFLISRFHPHNVLGIRTFADSMICRQLIDAADKYIDQNFAKVSQSEEFLALDCEQLLELMRRDE 195
            |.||..:..|.|.|||:.|||:...:.|......:..|.|..|||.||||.||.::|::.:..||
Mouse   156 AKFLEEQLDPCNCLGIQRFADTHSLKTLFTKCKTFALQTFEDVSQHEEFLELDKDELIDYICSDE 220

  Fly   196 LNVRTEEVIFEACMKWVKYAEDKRSELFPQVLAAVRLPLLSPQFLADRVAREELIRSSHQCRDLL 260
            |.:..||::|||.|:||..|.|.|..|..::|..||||||.|.:....|..::||::|.:|..||
Mouse   221 LVIGKEEMVFEAVMRWVYRAVDLRRPLLHELLTHVRLPLLHPNYFVQTVEVDQLIQNSPECYQLL 285

  Fly   261 DEAKDFHLMPERRGLLQSFRTRQRSGEFFTGQIYAVGGLASTGE-SVSTVEIYDPLTKKWK-MGE 323
            .||:.:|::...   :.|.|||.|....::..|..|||....|. ::...|.|||:|.:|| :.:
Mouse   286 HEARRYHILGNE---MMSPRTRPRRSTGYSEVIVVVGGCERVGGFNLPYTECYDPVTGEWKSLAK 347

  Fly   324 QMSMMRSRVGVAVLNGKLYAFGGFNGTERLST--VEVYDPRKNKWSQGCAMLCKRSAVGVAALDD 386
            .....:|...|..|...:...||     |:::  |.:|:.:.|.|.:..::...|....:|.|..
Mouse   348 LPEFTKSEYAVCALRNDILVSGG-----RINSRDVWIYNSQLNIWIRVASLNKGRWRHKMAVLLG 407

  Fly   387 CIYVCGGYDGVTSLNTVEVYYPKSNTWKTVAQMMKYRSAGGVTQLNGYVYAL-GGHDGLSIFDSV 450
            .:||.|||||...|::||.|...||.|..||.:.:..|:..||...|.::.: ||.|..:..|.|
Mouse   408 KVYVVGGYDGQNRLSSVECYDSFSNRWTEVAPLKEAVSSPAVTSCIGKLFVIGGGPDDNTCSDKV 472

  Fly   451 ERYDQAEDVWVKMSPM-LNRRCRLGVATLNGKIYVCGGYCGNSFLRSVECYDPQTDTWKLVTPMN 514
            :.||...:.|:..:.: :.:|| :...:||..|||.||     ..::|.||||..|.|..|....
Mouse   473 QSYDPETNSWLLRAAIPIAKRC-ITAVSLNNLIYVAGG-----LTKAVYCYDPVEDYWMHVQNTF 531

  Fly   515 CKRSRVALAANMGKLWAIGG--YDGESNLSTVEVYDPETDKWT---FMPPMCAHSGGV 567
            .::....::...||::.:||  .:||:. .|:..|||.|...|   .||...::.|.|
Mouse   532 SRQENCGMSVCNGKIYILGGRRENGEAT-DTILCYDPATSIITGVAAMPRPVSYHGCV 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_001262494.1 BTB 29..135 CDD:279045 45/105 (43%)
PHA03098 36..510 CDD:222983 171/479 (36%)
BACK 143..245 CDD:285009 42/101 (42%)
Kelch 292..339 CDD:128874 15/48 (31%)
KELCH repeat 329..372 CDD:276965 10/44 (23%)
Kelch 340..386 CDD:128874 10/47 (21%)
KELCH repeat 376..417 CDD:276965 17/40 (43%)
Kelch 387..433 CDD:128874 19/45 (42%)
KELCH repeat 423..466 CDD:276965 12/43 (28%)
Kelch 435..480 CDD:128874 11/46 (24%)
Kelch_1 469..514 CDD:279660 17/44 (39%)
KELCH repeat 470..514 CDD:276965 17/43 (40%)
Kelch_1 517..560 CDD:279660 14/47 (30%)
KELCH repeat 517..560 CDD:276965 14/47 (30%)
Klhl24NP_083712.4 BTB_POZ_KLHL24_KRIP6 48..168 CDD:349562 48/121 (40%)
PHA03098 62..566 CDD:222983 179/520 (34%)
Kelch 1 314..363 15/48 (31%)
KELCH repeat 354..393 CDD:276965 10/43 (23%)
Kelch 2 365..407 10/46 (22%)
KELCH repeat 397..441 CDD:276965 19/43 (44%)
Kelch 3 408..454 19/45 (42%)
KELCH repeat 444..489 CDD:276965 12/44 (27%)
Kelch 4 456..502 11/46 (24%)
KELCH repeat 492..529 CDD:276965 17/42 (40%)
Kelch 5 504..544 13/44 (30%)
KELCH repeat 536..578 CDD:276965 12/42 (29%)
Kelch 545..591 CDD:128874 15/45 (33%)
Kelch 6 546..592 14/44 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4441
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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