DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KLHL18 and Klhl30

DIOPT Version :9

Sequence 1:NP_001262494.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_081827.1 Gene:Klhl30 / 70788 MGIID:1918038 Length:581 Species:Mus musculus


Alignment Length:559 Identity:157/559 - (28%)
Similarity:243/559 - (43%) Gaps:99/559 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 YKHDKLFGESFPLFKEIRRMGKLCDVTLKVEDQTFSAHRVVLAATIPYFYAMFTNNMAESRIKEI 80
            :..|.|.|     .:.:|.:.||.||||.|.||....||.:||...|||:|||..:..||.:..:
Mouse    15 HAQDMLEG-----LQRLRSLPKLADVTLLVGDQELPCHRSLLALNSPYFHAMFAGDFTESFLARV 74

  Fly    81 TMKESAIEPSALESLINYVYSGQVRIDNQNVQNLMVGASFLQLSNVRDACASFLISRFHPHNVLG 145
            .:::  :||:.:..|:::||:|::.|...||:.|...||.|....|:..|..:|..:....|.||
Mouse    75 ELRD--VEPAMVGQLVDFVYTGRLTITQANVEALTRSASRLNFPTVQKVCGRYLQQQLDATNCLG 137

  Fly   146 IRTFADSMICRQLIDAADK---YIDQNFAKVSQSEEFLALDCEQLLELMRRDELNVRTEEVIFEA 207
            |..|.:.   :.|:..|.|   ::.:||..|:|.:|||.|..::|...:..|.|.|:.|:...||
Mouse   138 ICEFGEQ---QGLLGVAAKAWAFLRENFEAVAQEDEFLQLARDRLATCLASDLLQVQPEQSRLEA 199

  Fly   208 CMKWVKYAEDKRSELFPQVLAAVRLPLLSPQFLADRVAREELIRSSHQCRDLLDEAKDFHLMPER 272
            .::||::....|:...|::|:.|.|..:....:...:|.|.||:.|..|::.|.:...    .|.
Mouse   200 LLRWVRHDPQDRAAHLPELLSLVHLDAVPRPCVQQLLATEPLIQESEACQEALSQGHS----EEL 260

  Fly   273 RGLLQSFRTRQRSGEFFTGQIYAVGGLA-----STGESVS----TVEIYDPLTKKWKMGEQMSMM 328
            .||.|..:.          .:..|||.|     ..||..|    ....|:...::|         
Mouse   261 PGLPQKMQE----------VLVVVGGRALEEDEDGGEEPSHHTGNFAFYNTKARQW--------- 306

  Fly   329 RSRVGVAVLNGKLYAFGGFNGTERLSTVEVYDPRKNKWSQGCAMLCKRSAVGVAALDDCIYVCGG 393
                         .|...|             |..:||           ...:|||:..:||.||
Mouse   307 -------------MALPDF-------------PDYHKW-----------GFSLAALNSDVYVTGG 334

  Fly   394 YDG--VTSLNTVEVY-YP-KSNTWKTVAQMMKYRSAGGVTQLNGYVYALGGHDGLSIFDS--VER 452
            ..|  ..:.:|.:.: :| |...||.||.|:|.|:....|.|||.:||:||    :..|:  |||
Mouse   335 SRGTKTDTWSTTQAWCFPLKEAIWKPVAPMLKARTNHASTALNGEIYAIGG----TALDAVEVER 395

  Fly   453 YDQAEDVWVKMSPMLNRRCRLGVATLNGKIYVCGGYCGNSFLRSVECYDPQTDTWKLV-TPMNCK 516
            ||...|.|..:.|..........|...|::|:.|.......:.:::||.|.||.|.:: :|...|
Mouse   396 YDPYTDSWAPVGPAPKYVSNFSAAGCQGRLYLVGSSACKYNMLALQCYSPVTDAWSVIASPFLPK 460

  Fly   517 -RSRVALAANMGKLWAIGGYDGESNLSTVEVYDPETDKW 554
             .|....||..|.|:.||     .|...|.||||..:.|
Mouse   461 YLSSPRCAALNGALYLIG-----DNTKKVYVYDPGANLW 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_001262494.1 BTB 29..135 CDD:279045 37/105 (35%)
PHA03098 36..510 CDD:222983 137/491 (28%)
BACK 143..245 CDD:285009 29/104 (28%)
Kelch 292..339 CDD:128874 9/55 (16%)
KELCH repeat 329..372 CDD:276965 5/42 (12%)
Kelch 340..386 CDD:128874 8/45 (18%)
KELCH repeat 376..417 CDD:276965 13/44 (30%)
Kelch 387..433 CDD:128874 17/49 (35%)
KELCH repeat 423..466 CDD:276965 17/44 (39%)
Kelch 435..480 CDD:128874 14/46 (30%)
Kelch_1 469..514 CDD:279660 11/45 (24%)
KELCH repeat 470..514 CDD:276965 11/44 (25%)
Kelch_1 517..560 CDD:279660 14/38 (37%)
KELCH repeat 517..560 CDD:276965 14/38 (37%)
Klhl30NP_081827.1 BTB 23..127 CDD:279045 37/105 (35%)
PHA03098 29..494 CDD:222983 152/538 (28%)
BACK 135..237 CDD:285009 29/104 (28%)
Kelch 1 280..327 13/92 (14%)
KELCH repeat 319..364 CDD:276965 15/44 (34%)
Kelch 2 328..378 17/49 (35%)
Kelch 329..378 CDD:128874 17/48 (35%)
Kelch_1 367..408 CDD:279660 17/44 (39%)
KELCH repeat 368..410 CDD:276965 18/45 (40%)
Kelch 3 379..423 14/47 (30%)
KELCH repeat 413..455 CDD:276965 10/41 (24%)
Kelch 4 425..472 13/46 (28%)
KELCH repeat 462..499 CDD:276965 14/38 (37%)
Kelch 5 474..514 10/26 (38%)
KELCH repeat 504..551 CDD:276965
Kelch 6 515..564
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4441
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000036
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.