DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KLHL18 and Klhl28

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_079983.1 Gene:Klhl28 / 66689 MGIID:1913939 Length:571 Species:Mus musculus


Alignment Length:532 Identity:203/532 - (38%)
Similarity:295/532 - (55%) Gaps:15/532 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 IRRMGKLCDVTLKVEDQTFSAHRVVLAATIPYFYAMFTNNMAESRIKEITMKESAIEPSALESLI 96
            :|:..:|||:.|:|.|....||:||||:..|||.||||.|::|....|:..:  .|:.:||::::
Mouse    28 LRQHHELCDIILRVGDVKIHAHKVVLASISPYFKAMFTGNLSEKENSEVEFQ--CIDEAALQAIV 90

  Fly    97 NYVYSGQVRIDNQNVQNLMVGASFLQLSNVRDACASFLISRFHPHNVLGIRTFADSMICRQLIDA 161
            .|.|:|.|.|....|::|:..|:.||:..|...|.:||.|:..|.|.:||..||::..|..|..|
Mouse    91 EYAYTGTVFISQDTVESLLPAANLLQIKLVLKECCAFLESQLDPGNCIGISRFAETYGCHDLYLA 155

  Fly   162 ADKYIDQNFAKVSQSEEFLALDCEQLLELMRRDELNVRTEEVIFEACMKWVKYAEDKRSELFPQV 226
            |.|:|.|||..|.|:|||..|....|.|::..|.|||.|||.:|.|...|:||...:|.:...|:
Mouse   156 ATKFICQNFESVCQTEEFFELTHADLDEIVSNDCLNVATEETVFYALESWIKYDVQERQKYLAQL 220

  Fly   227 LAAVRLPLLSPQFLADRVAREELIRSSHQCRDLLDEAKDFHLMPERRGLLQS-FRTRQRSGEFFT 290
            |.:|||||||.:||........|||....|:.||:||..:|.|||.|...|: ..||.|..   .
Mouse   221 LNSVRLPLLSVKFLTRLYEANHLIRDDRTCKHLLNEALKYHFMPEHRLSHQTVLMTRPRCA---P 282

  Fly   291 GQIYAVGGLASTGESVSTVEIYDPLTKKWKMGEQMSMMRSRVGVAVLNGKLYAFGGFNGTER--- 352
            ..:.||||.:.....:.:||:|.|....|.....:::.|...|:.||:.|::..||...:.|   
Mouse   283 KVLCAVGGKSGLFACLDSVEMYFPQNDSWIGLAPLNIPRYEFGICVLDQKVFVIGGIETSVRPGM 347

  Fly   353 -----LSTVEVYDPRKNKWSQGCAMLCKRSAVGVAALDDCIYVCGGYDGVTSLNTVEVYYPKSNT 412
                 .::||.::|..|.|:....|...||.:|||.|...::..|||||.:.|.:||.|.||...
Mouse   348 TVRKHENSVECWNPDTNTWTSLERMNESRSTLGVAVLAGEVFALGGYDGQSYLQSVEKYIPKIRQ 412

  Fly   413 WKTVAQMMKYRSAGGVTQLNGYVYALGGHDGLSIFDSVERYDQAEDVWVKMSPMLNRRCRLGVAT 477
            |:.||.|...||......|:|.:||:||: |.:..:||||||.::|.|..::||.::|...||..
Mouse   413 WQPVAPMTTTRSCFAAAVLDGMLYAIGGY-GPAHMNSVERYDPSKDSWEMVAPMADKRIHFGVGV 476

  Fly   478 LNGKIYVCGGYCGNSFLRSVECYDPQTDTWKLVTPMNCKRSRVALAANMGKLWAIGGYDGESNLS 542
            :.|.|:|.||:.|.|.|.|:|.|||..:.|.:..||...|:.|..|.....|:.:||:.|.|.|:
Mouse   477 MLGFIFVVGGHNGVSHLSSIERYDPHQNQWTVCRPMKEPRTGVGAAVIDNYLYVVGGHSGSSYLN 541

  Fly   543 TVEVYDPETDKW 554
            ||:.|||.:|.|
Mouse   542 TVQKYDPISDTW 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556 40/104 (38%)
PHA03098 36..510 CDD:222983 184/482 (38%)
KELCH repeat 329..372 CDD:276965 13/50 (26%)
KELCH repeat 376..417 CDD:276965 18/40 (45%)
KELCH repeat 423..466 CDD:276965 17/42 (40%)
KELCH repeat 470..514 CDD:276965 18/43 (42%)
Kelch_1 517..560 CDD:396078 16/38 (42%)
KELCH repeat 517..560 CDD:276965 16/38 (42%)
Klhl28NP_079983.1 PHA03098 35..553 CDD:222983 200/523 (38%)
Kelch 1 284..331 13/46 (28%)
KELCH repeat 321..372 CDD:276965 13/50 (26%)
Kelch 2 332..386 16/53 (30%)
KELCH repeat 376..419 CDD:276965 20/42 (48%)
Kelch 3 387..433 18/45 (40%)
KELCH repeat 423..465 CDD:276965 17/42 (40%)
Kelch 4 435..479 18/44 (41%)
KELCH repeat 469..513 CDD:276965 18/43 (42%)
Kelch 5 480..526 18/45 (40%)
KELCH repeat 516..559 CDD:276965 16/38 (42%)
Kelch 6 528..570 13/26 (50%)

Return to query results.
Submit another query.