DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and klhl38b

DIOPT Version :9

Sequence 1:NP_001262494.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:XP_691797.2 Gene:klhl38b / 563341 ZFINID:ZDB-GENE-120727-8 Length:591 Species:Danio rerio


Alignment Length:551 Identity:145/551 - (26%)
Similarity:253/551 - (45%) Gaps:34/551 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LFKEIRRMGK---LCDVTLKVEDQTFSAHRVVLAATIPYFYAMFTNNMAESRIKEITMKESAIEP 89
            |..|:..:.|   |.||.|..|::....||.||.::.|||:|||.:|..|::...|.::  .:..
Zfish    29 LLLELNTLRKDRILTDVVLCSENKEIPCHRNVLVSSSPYFHAMFCSNFLETQKSRINLE--GVPH 91

  Fly    90 SALESLINYVYSGQVRIDNQNVQNLMVGASFLQLSNVRDACASFLISRFHPHNVLGIRTFADSMI 154
            ..|..::.|||:|.:.|..:.|..|:..||.||...:.:||::||.::....|.|.:...::.:.
Zfish    92 EILAMIVEYVYTGSISISMELVLPLIQTASMLQYGRLFEACSTFLQAQLSADNCLSMIRLSEILH 156

  Fly   155 CRQLIDAADKYIDQNFAKVSQSEEFLALDCEQLLELMRRDELNVRTEEVIFEACMKWVKYAEDKR 219
            |..|.:.|.:...::|:.|..||:|..|...:|:..:..|:|.|. ||.:||..:.|:.:....|
Zfish   157 CSSLHEKARELAIKSFSDVVVSEDFCELSLPELVSYLEDDKLCVE-EEQVFETLLAWIHHDPFSR 220

  Fly   220 SELFPQVLAAVRLPLLSPQFLADRVAREELIRSSHQCRDLLDEAKD--FHLMPERRGLLQS-FRT 281
            ......:...|||..:.|.:|...:|.:.|::||..|.|:::..:.  |.:.....|.|:. :||
Zfish   221 HGTIHDLFRRVRLRHVHPYYLFQFIANDPLVQSSSLCTDIIESVRRLLFSVGTHCPGDLEPLWRT 285

  Fly   282 --RQRSGEFFTGQIYAVGGLASTGESVSTVEIYDPLTKKWKMGEQMSMMRSRVGVAVLNGKLYAF 344
              ||...|    .:..|||..:..::.....:||..:..||...::.:...|.....::..||..
Zfish   286 PRRQNCKE----GLVVVGGRKNGEQTSREALLYDEQSHCWKWLAKIPLRLYRPAYVCMHSILYVL 346

  Fly   345 GGF---NGTE--RLSTVEVYDPRKNKWSQGCAMLCKRSAVGVAALDDCIYVCGGY--DGVTSLNT 402
            ||.   :|::  ..:||.....:.|:|..|.:||..|.....|.....|:|.||.  ||..| |.
Zfish   347 GGLTMKSGSQCTPSNTVYTLSLKTNQWRMGESMLTSRYGHQSATYLHFIFVLGGLGADGQLS-NE 410

  Fly   403 VEVYYPKSNTWKTVAQMMKYRSAGGVTQLNGYVYALGGHDGL-SIFDSVERYDQAEDVWVKMSPM 466
            ||.|....|.|:.:|.|........|...|..:|..||.|.: .....::.|....::|.::...
Zfish   411 VERYDTMFNQWEAMAPMPTAVLHPAVAAHNQRIYVFGGEDAMQKPVRMIQVYHIGRNMWCRIENR 475

  Fly   467 LNRRCRLGVATLNGKIYVCGGYCGNSFLRSVECYDPQTDTWKLVTPMNCKRSRVALAANMGKLWA 531
            ..:......|.::.|||:.|||     .|.:..||.:::|::....|..::...:.....||::.
Zfish   476 TVKNVCAPAAVIDDKIYIVGGY-----TRRMVAYDVKSNTFEKCENMKARKMHHSATVVNGKIYV 535

  Fly   532 IGG-----YDGESNLSTVEVYDPETDKWTFM 557
            .||     ::...:..:.:.:||:||.||.|
Zfish   536 TGGRFFNSHERVEDSDSFDCFDPKTDAWTSM 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_001262494.1 BTB 29..135 CDD:279045 35/108 (32%)
PHA03098 36..510 CDD:222983 131/489 (27%)
BACK 143..245 CDD:285009 25/101 (25%)
Kelch 292..339 CDD:128874 8/46 (17%)
KELCH repeat 329..372 CDD:276965 11/47 (23%)
Kelch 340..386 CDD:128874 14/50 (28%)
KELCH repeat 376..417 CDD:276965 15/42 (36%)
Kelch 387..433 CDD:128874 16/47 (34%)
KELCH repeat 423..466 CDD:276965 8/43 (19%)
Kelch 435..480 CDD:128874 7/45 (16%)
Kelch_1 469..514 CDD:279660 11/44 (25%)
KELCH repeat 470..514 CDD:276965 11/43 (26%)
Kelch_1 517..560 CDD:279660 11/46 (24%)
KELCH repeat 517..560 CDD:276965 11/46 (24%)
klhl38bXP_691797.2 BTB 33..137 CDD:279045 34/105 (32%)
PHA03098 34..512 CDD:222983 131/490 (27%)
BACK 145..243 CDD:197943 25/98 (26%)
KELCH repeat 337..379 CDD:276965 10/41 (24%)
Kelch 343..386 CDD:128874 13/42 (31%)
KELCH repeat 383..427 CDD:276965 16/44 (36%)
Kelch 395..440 CDD:128874 16/45 (36%)
KELCH repeat 431..518 CDD:276965 19/91 (21%)
Kelch_6 432..>469 CDD:290672 7/36 (19%)
Kelch 490..531 CDD:128874 11/45 (24%)
KELCH repeat 521..570 CDD:276965 11/46 (24%)
Kelch_1 523..570 CDD:279660 11/44 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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