DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KLHL18 and klhl30

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:XP_688150.5 Gene:klhl30 / 559694 ZFINID:ZDB-GENE-100913-2 Length:593 Species:Danio rerio


Alignment Length:529 Identity:146/529 - (27%)
Similarity:253/529 - (47%) Gaps:60/529 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 KLCDVTLKVEDQTFSAHRVVLAATIPYFYAMFTNNMAESRIKEITMKESAIEPSALESLINYVYS 101
            |..||||....:.|..||.:||....||::||:.:..||....:.:.:  ::|..|.||:::.|:
Zfish    31 KFVDVTLSAGGRDFPCHRGILALCSHYFHSMFSGDFIESIAARVELHD--VDPDVLSSLLDFAYT 93

  Fly   102 GQVRIDNQNVQNLMVGASFLQLSNVRDACASFLISRFHPHNVLGIRTFADSMICRQLIDAADKYI 166
            |::.|:..||:.|:..:|.||...||..|..:|..:....|.|||..|.:...|.:::..|..::
Zfish    94 GKLTINKNNVEGLICTSSQLQFHTVRSVCCRYLQHQIDATNCLGILEFGEIHGCPEVVAKAWSFL 158

  Fly   167 DQNFAKVSQSEEFLALDCEQLLELMRRDELNVRTEEVIFEACMKWVKYAEDKRSELFPQVLAAVR 231
            .:||..|.|.||||.|:.::|:..::.::|::|.:....||.:.||::::|.|.....::|:..:
Zfish   159 LENFEAVKQHEEFLQLEKDRLVACLKDEDLHLRDDRSCAEAVVSWVRHSKDSRICDLRELLSLAK 223

  Fly   232 LPLLSPQFLADRVAREELIRSSHQCRDLLDEAKDFHLMPERRGLLQSFRTRQRSGEFFTGQ---I 293
            |.|||..:|.:.:.:|.|:::|.:.|:|::     .:..|:|.|....:|.||:.:....|   :
Zfish   224 LSLLSESYLTENLLKEPLVQNSLESRELVE-----RICREKRQLTGDGKTEQRATQDAFNQQEVL 283

  Fly   294 YAVGGLASTGESVSTVEIYDPLTKKWKMGEQMSMMRSRVGVAVLNGKLYAFG-GFNGTERLSTVE 357
            :.:|| .|..:|....|..|               .:|      :|:|:... ||...:.....:
Zfish   284 FVMGG-RSLDDSDDEDEDED---------------ENR------DGRLHPRNCGFYNPKLGQWFQ 326

  Fly   358 VYD-PRKNKWSQGCAMLCKRSAVGVAALDDCIYVCGGYDGVTS--LNTVEV--YYPKSNTWKTVA 417
            :.| |..|||           ...|.:|::.:||.||..|..|  .:|.|.  |..:...|.|||
Zfish   327 LPDFPNYNKW-----------GYSVISLNNNVYVTGGSRGSQSNTWSTTETWKYITREGKWVTVA 380

  Fly   418 QMMKYRSAGGVTQLNGYVYALGGHDGLSIFDSVERYDQAEDVWVKMSPMLNRRCRLGVATLNGKI 482
            .|::.|:......|||.:|.:||    :..|.|||||...:.|...||.|............||:
Zfish   381 PMLRPRTNHSSATLNGEIYVIGG----TTTDFVERYDPFSNCWTLTSPALKYVTNFTATPCEGKL 441

  Fly   483 YVCGGYCGNSFLRSVECYDPQTDTWKLV-TPMNCKRSRVALAANM-GKLWAIGGYDGESNLSTVE 545
            |:.|.........:::||:|..|:|.:: :|...|......:.:| |.::.||     .|...|.
Zfish   442 YLIGSCAVKYNALTMQCYNPVIDSWCIIGSPFIPKYLSSPCSVSMDGVIYLIG-----DNTKKVY 501

  Fly   546 VYDPETDKW 554
            .|||:::.|
Zfish   502 SYDPDSNVW 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556 33/99 (33%)
PHA03098 36..510 CDD:222983 134/481 (28%)
KELCH repeat 329..372 CDD:276965 10/44 (23%)
KELCH repeat 376..417 CDD:276965 13/44 (30%)
KELCH repeat 423..466 CDD:276965 15/42 (36%)
KELCH repeat 470..514 CDD:276965 10/44 (23%)
Kelch_1 517..560 CDD:396078 10/39 (26%)
KELCH repeat 517..560 CDD:276965 10/39 (26%)
klhl30XP_688150.5 None

Return to query results.
Submit another query.