DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and klhl4

DIOPT Version :9

Sequence 1:NP_001262494.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_001314940.1 Gene:klhl4 / 559349 ZFINID:ZDB-GENE-070410-63 Length:567 Species:Danio rerio


Alignment Length:477 Identity:169/477 - (35%)
Similarity:257/477 - (53%) Gaps:57/477 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 NSQVEDQYF-VYKHDKLFGESFPLFKEIRRMGKLCDVTLKVEDQTFSAHRVVLAATIPYFYAMFT 69
            :|...|::| ...|.:   ::|...:...:..:||||.|...|....|||:||:|...||.||||
Zfish   147 SSNCSDEFFQATNHAE---QTFRKMETYLQHKQLCDVLLIAGDHKIPAHRLVLSAVSDYFAAMFT 208

  Fly    70 NNMAESRIKEITMKESAIEPSALESLINYVYSGQVRIDNQNVQNLMVGASFLQLSNVRDACASFL 134
            |::.|::.:||.|:  .::|.||.:|:::.|:|.:.:..:.:::|:..|..||||.|...|.:||
Zfish   209 NDVREAKQEEIKME--GVDPEALRALVHFAYTGVLELKEETIESLLAAACLLQLSQVIQVCCNFL 271

  Fly   135 ISRFHPHNVLGIRTFADSMICRQLIDAADKYIDQNFAKVSQSEEFLALDCEQLLELMRRDELNVR 199
            :.:.||.|.||||:|||:..|..|:..|..|..::|.:|.|::|||.|...::::|:..|::||.
Zfish   272 MKQLHPSNCLGIRSFADAQGCTDLLKVAHNYTMEHFLEVIQNQEFLLLPTMEIVKLLASDDINVP 336

  Fly   200 TEEVIFEACMKWVKYAEDKRSELFPQVLAAVRLPLLSPQFLADRVAREELIRSSHQCRDLLDEAK 264
            .||.||:|.|.||::....|.:....:||.:|||||.||.||| :...::.....:|:.||.||.
Zfish   337 DEETIFQALMMWVRHDVQHRQQDLGVLLAYIRLPLLPPQLLAD-LENNKMFSEDLECQKLLMEAM 400

  Fly   265 DFHLMPERRGLLQSFRTRQRSGEFFTGQIYAVGGLASTGESVSTVEIYDPLTKKWKMGEQMSMMR 329
            .:||:||||.:|||.||:.|.                     |||                    
Zfish   401 KYHLLPERRPMLQSPRTKPRK---------------------STV-------------------- 424

  Fly   330 SRVGVAVLNGKLYAFGGFNGTERLSTVEVYDPRKNKWSQGCAMLCKRSAVGVAALDDCIYVCGGY 394
                     |.|||.||.:.::..:|:|.||.|.|:|.|...|..:|...|||.:|:.:||.||.
Zfish   425 ---------GSLYAVGGMDASKGSTTIEKYDLRTNRWIQVGVMNGRRLQFGVAVIDNKLYVVGGR 480

  Fly   395 DGVTSLNTVEVYYPKSNTWKTVAQMMKYRSAGGVTQLNGYVYALGGHDGLSIFDSVERYDQAEDV 459
            ||:.:.|.||.|.|.:..|.|:..|..:|...|:..|.|.:||:|||||.|..::|||:|.....
Zfish   481 DGLKTSNMVECYNPITKVWSTMPPMSTHRHGLGIAVLEGPMYAVGGHDGWSYLNTVERWDPQARQ 545

  Fly   460 WVKMSPMLNRRCRLGVATLNGK 481
            |..::.|...|..:||..||||
Zfish   546 WNYVASMSTPRSTVGVTALNGK 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_001262494.1 BTB 29..135 CDD:279045 38/105 (36%)
PHA03098 36..510 CDD:222983 164/446 (37%)
BACK 143..245 CDD:285009 43/101 (43%)
Kelch 292..339 CDD:128874 3/46 (7%)
KELCH repeat 329..372 CDD:276965 14/42 (33%)
Kelch 340..386 CDD:128874 18/45 (40%)
KELCH repeat 376..417 CDD:276965 18/40 (45%)
Kelch 387..433 CDD:128874 17/45 (38%)
KELCH repeat 423..466 CDD:276965 17/42 (40%)
Kelch 435..480 CDD:128874 18/44 (41%)
Kelch_1 469..514 CDD:279660 7/13 (54%)
KELCH repeat 470..514 CDD:276965 7/12 (58%)
Kelch_1 517..560 CDD:279660
KELCH repeat 517..560 CDD:276965
klhl4NP_001314940.1 BTB 168..271 CDD:279045 37/104 (36%)
BTB 179..275 CDD:197585 37/97 (38%)
BACK 280..368 CDD:285009 33/87 (38%)
Kelch 427..472 CDD:128874 18/44 (41%)
Kelch_1 461..506 CDD:279660 18/44 (41%)
KELCH repeat 462..506 CDD:276965 18/43 (42%)
KELCH repeat 509..554 CDD:276965 18/44 (41%)
Kelch 522..566 CDD:128874 18/43 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D312716at33208
OrthoFinder 1 1.000 - - FOG0000036
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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