DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and si:ch211-256e16.3

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:XP_003198234.2 Gene:si:ch211-256e16.3 / 556381 ZFINID:ZDB-GENE-131127-256 Length:621 Species:Danio rerio


Alignment Length:571 Identity:195/571 - (34%)
Similarity:302/571 - (52%) Gaps:27/571 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VEDQYFVYKHDKLFGESFPLFKEIRRMGKL-------------CDVTLKVEDQTFSAHRVVLAAT 60
            |||..|..  ..|..|.: :|.|.|...|:             |||||....|.|..||:|||:.
Zfish    24 VEDSGFPL--SSLDSEDY-VFVETRHPNKVLEGLNSLRLNNAFCDVTLCCGGQEFPCHRIVLASF 85

  Fly    61 IPYFYAMFTNNMAESRIKEITMKESAIEPSALESLINYVYSGQVRIDNQNVQNLMVGASFLQLSN 125
            ..||.|||:.::.|||.:.:.:  :.:||..:..|::|.|:.:|.|...|||.|:..|:.|.:..
Zfish    86 SSYFQAMFSTDLMESRQERVAI--NGVEPQMIGMLVSYAYTAEVVISKANVQALLAAANLLDVMA 148

  Fly   126 VRDACASFLISRFHPHNVLGIRTFADSMICRQLIDAADKYIDQNFAKVSQSEEFLALDCEQLLEL 190
            ||:||..|:..:....|.:||..||::..||:|...:.:||.|:|:.|||.||||:|..::|:|:
Zfish   149 VREACCRFMERQMDEMNCVGIHCFAEAHSCRELERRSMEYIQQHFSTVSQQEEFLSLCGDKLIEI 213

  Fly   191 MRRDELNVRTEEVIFEACMKWVKYAEDKRSELFPQVLAAVRLPLLSPQFLADRVAREELIRSSHQ 255
            :..|.|||..||.:|||.:.|::.:..:| :.|.:||..:||||:||.::.|.:...::::.|.|
Zfish   214 ISSDHLNVPKEETVFEAAIVWLEKSLSRR-QSFEKVLEHIRLPLISPYYIHDVIETLDVVKESLQ 277

  Fly   256 CRDLLDEAKDFHLMPERRGLLQSFRTRQRSGEFFTGQIYAVGGLASTGESVSTVEIYDPLTKKWK 320
            |:.|:.||||:.|:.:|||.|.|.|.|.|........|..||| ......:.:||.:|||..:||
Zfish   278 CQKLISEAKDYLLLQDRRGELYSPRARPRRATGTAEVIVTVGG-EDDKVVLRSVESFDPLNGQWK 341

  Fly   321 MGEQMSMMRSRVGVAVLNGKLYAFGG-FNGTERLSTVEVYDPRKNKWSQGCAMLCKRSAVGVAAL 384
            ....:....|:.|:.|....||..|| |........:..|||..:.|.:...|...||.:|:..|
Zfish   342 SLACLPFAVSKHGLVVSGSMLYLAGGEFPDGSASREMWRYDPCFDSWLEMAPMNVARSELGLVML 406

  Fly   385 DDCIYVCGGYDGVTSLNTVEVYYPKSNTWKTVAQMMKYRSAGGVTQLNGYVYALGG---HDGLSI 446
            |..::..||::|.:.|::||.|.|.:|||:.:..:....::..|..|:|.:|..||   .||...
Zfish   407 DGYVFAVGGWEGRSRLDSVECYNPHTNTWQFMESVKMAVTSPAVVSLDGLLYVTGGAVLEDGDGT 471

  Fly   447 FDSVERYDQAEDVWVKMSPMLNRRCRLGVATLNGKIYVCGG-YCGNSFLRSVECYDPQTDTWKLV 510
             |..:.|:....||.:::||...|.......|.|||||.|| :........||||||:|:.|.:.
Zfish   472 -DLAQVYNPKTCVWSEVAPMQIARSGSASCILKGKIYVIGGWHASTENTDKVECYDPKTNKWTMC 535

  Fly   511 TPMNCKRSRVALAANMGKLWAIGGYDG-ESNLSTVEVYDPETDKWTFMPPM 560
            .||..:|.|..:|...||::.:||.:| :....|:|.|..::|.|..:..|
Zfish   536 APMKERRYRPGVAVVDGKIYVLGGEEGWDRYHDTIERYCEDSDSWEIVGEM 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556 44/129 (34%)
PHA03098 36..510 CDD:222983 170/491 (35%)
KELCH repeat 329..372 CDD:276965 12/43 (28%)
KELCH repeat 376..417 CDD:276965 16/40 (40%)
KELCH repeat 423..466 CDD:276965 12/45 (27%)
KELCH repeat 470..514 CDD:276965 18/44 (41%)
Kelch_1 517..560 CDD:396078 13/43 (30%)
KELCH repeat 517..560 CDD:276965 13/43 (30%)
si:ch211-256e16.3XP_003198234.2 PHA03098 63..598 CDD:222983 185/529 (35%)
KELCH repeat 306..346 CDD:276965 12/40 (30%)
KELCH repeat 353..394 CDD:276965 11/40 (28%)
KELCH repeat 398..490 CDD:276965 28/92 (30%)
KELCH repeat 494..539 CDD:276965 18/44 (41%)
KELCH repeat 542..588 CDD:276965 14/45 (31%)

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