DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and klhl40a

DIOPT Version :9

Sequence 1:NP_001262494.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_001122154.1 Gene:klhl40a / 553257 ZFINID:ZDB-GENE-050916-1 Length:612 Species:Danio rerio


Alignment Length:555 Identity:153/555 - (27%)
Similarity:256/555 - (46%) Gaps:44/555 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 KLCDVTLKVEDQTFSAHRVVLAATIPYFYAMFTNNMAESRIKEITMKESAIEPSALESLINYVYS 101
            |..|..||::|:.|..||:|||||.|||.|||.:::.||:.:||.:|:  |||..:..::.|:|:
Zfish    32 KFVDCILKIKDKEFPCHRLVLAATSPYFKAMFLSDLEESKKREIVLKD--IEPGIMGMILRYIYT 94

  Fly   102 GQVRIDNQNVQNLMVGASFLQLSNVRDACASFLISRFHPHNVLGIRTFADSMICRQLIDAADKYI 166
            ..:.:..||||::.:.|:..|:.::...|.|:|..:....|.|.|......:.|.:|...|..:|
Zfish    95 SDINLTEQNVQDIFMAANMYQIPSIFSVCVSYLQQKLVLSNCLAIFRLGLLLDCPRLAMEARDFI 159

  Fly   167 DQNFAKVSQSEEFLALDCEQLLELMRRDELNVRTEEVIFEACMKWVKYAEDKRSELFPQVLAAVR 231
            ...:..:.:.::|..|...:|..::..|.|||..||.:||:.|.||:|..|:|::..|::|..||
Zfish   160 CDRYLLIIRDQDFHQLGPSELAAIITCDSLNVEREESVFESLMDWVEYDTDERTKELPELLHCVR 224

  Fly   232 LPLLSPQFLADRVAREELIRSSHQCRDLLDEAKDFHLMPERRGLL-----QSFRTRQRSGEFFTG 291
            ..|:...:..::|....|||::.:.:..|...||     .::|||     .|.|...:|.||.:.
Zfish   225 FRLMPTSYFKEKVEGHRLIRTNQELKKELQLIKD-----AQKGLLHRVKRSSHRKEGKSAEFESD 284

  Fly   292 QIYAVG---GLASTG------ESVSTVEIYDPLTKKWKMG--------EQMSMMRSRVGVAVLNG 339
            .....|   |:.:..      :|...:.|.|..|..:.:|        ....:.::...:.....
Zfish   285 DDDEDGLLPGILNDNPRFGMFQSDLILMINDAGTVAYDVGANECFVASSSTEIPKNHCSLVTKEN 349

  Fly   340 KLYAFGGFNGTER------LSTVEVYDPRKNKWSQGCAMLCKRSAVGVAALDDCIYVCGG---YD 395
            :::..||....|.      .|....:||..::|....::...|...|:...::.|||.||   .:
Zfish   350 QIFVVGGLRYNEENKDQPFSSYFLQFDPMSSEWLGMPSLPNPRCLFGLVEAENSIYVVGGKELKE 414

  Fly   396 GVTSLNTVEVYYPKSNTWKTVAQMMKYRSAG-GVTQLNGYVYALGGH-DGLSIFDSVERYDQAED 458
            |..:|::|.:|..:|..|.. :..:.|...| |:....|.||.:||. :.......|..||.::.
Zfish   415 GERALDSVMIYDRQSFKWGE-SDPLPYAVYGHGIVSHKGLVYVIGGKTESKKCLRRVCVYDPSKF 478

  Fly   459 VWVKMSPMLNRRCRLGVATLNGKIYVCGGYCGNSFLRSVECYDPQTDTWKLVTPMNCKRSRVALA 523
            .|..::||...|...|.|....||||..|...|....:||.||..:::|........:||.:.|.
Zfish   479 EWKDLAPMKTARSLFGTAVHKNKIYVVTGVTDNGLTSTVEVYDIASNSWSEFVDFPQERSSLNLV 543

  Fly   524 ANMGKLWAIGGYDGESNLSTVEVYDPE--TDKWTF 556
            ...|.|:||||:....| .|.|..:|.  .|.|.|
Zfish   544 ELGGFLYAIGGFAMMPN-ETTEKLEPTEMNDIWKF 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_001262494.1 BTB 29..135 CDD:279045 37/97 (38%)
PHA03098 36..510 CDD:222983 137/505 (27%)
BACK 143..245 CDD:285009 28/101 (28%)
Kelch 292..339 CDD:128874 7/63 (11%)
KELCH repeat 329..372 CDD:276965 7/48 (15%)
Kelch 340..386 CDD:128874 9/51 (18%)
KELCH repeat 376..417 CDD:276965 13/43 (30%)
Kelch 387..433 CDD:128874 14/49 (29%)
KELCH repeat 423..466 CDD:276965 11/44 (25%)
Kelch 435..480 CDD:128874 13/45 (29%)
Kelch_1 469..514 CDD:279660 14/44 (32%)
KELCH repeat 470..514 CDD:276965 14/43 (33%)
Kelch_1 517..560 CDD:279660 16/42 (38%)
KELCH repeat 517..560 CDD:276965 16/42 (38%)
klhl40aNP_001122154.1 BTB 26..128 CDD:279045 37/97 (38%)
PHA03098 48..540 CDD:222983 133/499 (27%)
BACK 136..236 CDD:197943 28/99 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 266..290 5/23 (22%)
KELCH repeat 341..388 CDD:276965 7/46 (15%)
Kelch 1 350..402 9/51 (18%)
Kelch 350..398 CDD:128874 9/47 (19%)
Kelch_1 391..432 CDD:279660 12/40 (30%)
KELCH repeat 392..438 CDD:276965 13/46 (28%)
Kelch 2 403..452 14/49 (29%)
KELCH repeat 442..487 CDD:276965 12/44 (27%)
Kelch 453..500 CDD:128874 13/46 (28%)
Kelch 3 453..500 13/46 (28%)
Kelch_1 489..529 CDD:279660 14/39 (36%)
KELCH repeat 490..535 CDD:276965 14/44 (32%)
Kelch 4 502..547 13/44 (30%)
Kelch 5 549..604 12/30 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4441
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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