DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and Kbtbd8

DIOPT Version :9

Sequence 1:NP_001262494.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_001102720.2 Gene:Kbtbd8 / 500262 RGDID:1563166 Length:601 Species:Rattus norvegicus


Alignment Length:560 Identity:149/560 - (26%)
Similarity:250/560 - (44%) Gaps:116/560 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LFKEIRRM---GKLCDVTLKVE-DQTFSAHRVVLAATIPYFYAMFTNNMAESRIKEITMKESAIE 88
            :.|:::.|   |:|.|:.::|: .:|||.||.||||..|||.:|||:.:.||..||:.:  ..:|
  Rat    35 ILKQLKTMYDEGQLTDIVVEVDHGKTFSCHRNVLAAISPYFRSMFTSGLTESTQKEVRI--IGVE 97

  Fly    89 PSALESLINYVYSGQVRIDNQNVQNLMVGASFLQLSNVRDACASFLISRFHPHNVLGIRTFADSM 153
            ..::..::||.|:.:|.:...|||.|...||..|:.:::|.||.::||...|.|.:|:..|||..
  Rat    98 AESMGLVLNYAYTSRVILTEANVQALFTTASIFQIPSIQDQCAKYMISHLDPQNSIGVFIFADHY 162

  Fly   154 ICRQLIDAADKYIDQNFAKVSQSEEFLALDCEQLLELMRRDELNVRTEEVIFEACMKWVKYAEDK 218
            ..::|.|.:.:||.:.|..|::.:|||.|..:||:.::..|:|||..||.::|:.::|.::.:::
  Rat   163 GHQELGDRSKEYIRKKFLCVTKEQEFLQLTKDQLISILDSDDLNVDREEHVYESIIRWFEHEQNE 227

  Fly   219 RSELFPQVLA-AVRLPLLSPQFLADRVAR--EELIRSSHQCRDLLDEAKDFHLMPERRGLLQSFR 280
            |....|::.| .:|.||:...|:.....|  :.:::|   |.:              :|...:..
  Rat   228 REVHLPEIFAKCIRFPLMEDAFIEKIPPRFAQAIVKS---CGE--------------KGPSNTNG 275

  Fly   281 TRQRSGEFFTGQIYAVGGLASTGESVSTVEIYDPLTKKWKMGEQMSMMRSRVGVAVLNGKLYAFG 345
            ..||.|...:..|..............||...|                      ::.|:::   
  Rat   276 CTQRLGMTASEMIICFDAAHKHSGKKQTVPCLD----------------------IVTGRVF--- 315

  Fly   346 GFNGTERLSTVEVYDPRKNKWSQGCAMLCK----RSAVGV-AALDDCIYVCGGYDGVTSLNTVE- 404
                                      .|||    ...||: .:.|:.||:.|||...:|..::: 
  Rat   316 --------------------------KLCKPPNDLREVGILVSPDNDIYIAGGYRPSSSEVSIDH 354

  Fly   405 -------VYYPKSNTWKTVAQMMKYRSAGGVTQLNGYVYALGGH----DGLSIFDSVERYDQAED 458
                   :|...:|.|.:...:::.|....:....|.:||:||.    ||.:...|||.||..|:
  Rat   355 KAENDFWMYDHSTNRWLSKPSLLRARIGCKLVYCCGKMYAIGGRVYEGDGRNSLKSVECYDSREN 419

  Fly   459 VWVKMSPMLNRRCRLGVA-------TLNGKIYVCGGYCGNSFLRSVECYDPQTDTWKLVTPMNCK 516
            .|:.:       |.:.||       ....||||..   |..||    .|:||.|.|..:|||...
  Rat   420 CWMTV-------CAMPVAMEFHNAVEHKEKIYVLQ---GEFFL----FYEPQKDYWGFLTPMTVP 470

  Fly   517 RSRVALAANMGKLWAIGGYDG-ESNLSTVEVYDPETDKWT 555
            |.:...|.....::.|.|..| ...:.|||.||.|.:|||
  Rat   471 RIQGLAAVYKDSIYYIAGTCGNHQRVFTVEAYDIELNKWT 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_001262494.1 BTB 29..135 CDD:279045 40/109 (37%)
PHA03098 36..510 CDD:222983 130/501 (26%)
BACK 143..245 CDD:285009 31/102 (30%)
Kelch 292..339 CDD:128874 4/46 (9%)
KELCH repeat 329..372 CDD:276965 1/42 (2%)
Kelch 340..386 CDD:128874 5/50 (10%)
KELCH repeat 376..417 CDD:276965 12/49 (24%)
Kelch 387..433 CDD:128874 10/53 (19%)
KELCH repeat 423..466 CDD:276965 15/46 (33%)
Kelch 435..480 CDD:128874 16/55 (29%)
Kelch_1 469..514 CDD:279660 17/51 (33%)
KELCH repeat 470..514 CDD:276965 17/50 (34%)
Kelch_1 517..560 CDD:279660 14/40 (35%)
KELCH repeat 517..560 CDD:276965 14/40 (35%)
Kbtbd8NP_001102720.2 BTB 39..144 CDD:279045 39/106 (37%)
PHA03098 50..516 CDD:222983 145/545 (27%)
BACK 153..250 CDD:285009 30/96 (31%)
KELCH repeat 330..376 CDD:276965 10/45 (22%)
Kelch 337..388 CDD:128874 10/50 (20%)
Kelch_1 379..428 CDD:279660 16/55 (29%)
KELCH repeat 380..428 CDD:276965 16/54 (30%)
KELCH repeat 431..467 CDD:276965 13/42 (31%)
Kelch_1 470..516 CDD:279660 14/41 (34%)
KELCH repeat 519..571 CDD:276965
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4441
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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