DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and klhl24b

DIOPT Version :9

Sequence 1:NP_001262494.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_956734.1 Gene:klhl24b / 393412 ZFINID:ZDB-GENE-040426-1185 Length:398 Species:Danio rerio


Alignment Length:355 Identity:129/355 - (36%)
Similarity:187/355 - (52%) Gaps:20/355 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VYKHDKLFGESFP--------LFKEIRRMGKLCDVTLKVEDQTFSAHRVVLAATIPYFYAMFTNN 71
            |..||.....|.|        :|.|.|......||.:.||.:.|..||.||:|...||.|||.|:
Zfish    34 VSNHDVFDFSSGPCHSDSILQMFNEFRDGRLFTDVVISVEGREFPCHRAVLSACSSYFRAMFCND 98

  Fly    72 MAESRIKEITMKESAIEPSALESLINYVYSGQVRIDNQNVQNLMVGASFLQLSNVRDACASFLIS 136
            ..|||  |:.::.:.|...|:::.:.|||:|:.||...|||.|...:|..|:|.:|||||.||..
Zfish    99 HRESR--EMLVEINGIRAEAMDTFLQYVYTGRARITTDNVQFLFETSSLFQISTLRDACAKFLED 161

  Fly   137 RFHPHNVLGIRTFADSMICRQLIDAADKYIDQNFAKVSQSEEFLALDCEQLLELMRRDELNVRTE 201
            :..|.|.|||:.|||:...:||......|..|:||.|:|.||||.|..|:|.|.:..||:.:..|
Zfish   162 QLDPCNCLGIQRFADAHSLKQLASRCRSYALQSFADVAQHEEFLDLRKEELEEYIASDEMVIGKE 226

  Fly   202 EVIFEACMKWVKYAEDKRSELFPQVLAAVRLPLLSPQFLADRVAREELIRSSHQCRDLLDEAKDF 266
            |.:|||.|:||.|..|.|..:...:|..||||||.|.:....|..::||:::.:|..||.||:.:
Zfish   227 ETVFEAVMRWVYYDVDHRRIMLKDLLNHVRLPLLHPNYFVQTVEGDQLIQNAPECYQLLHEARRY 291

  Fly   267 HLMPERRGLLQSFRTRQRSGEFFTGQIYAVGGLASTGE-SVSTVEIYDPLTKKWK-MGEQMSMMR 329
            |::...   :.|.|||.|....|:..|..|||....|. ::...|.|||:|.:|| :.:.....:
Zfish   292 HVLGNE---MMSPRTRPRRSTGFSEVIVVVGGCERMGGFNLPYTECYDPVTGEWKSLAKLPEFTK 353

  Fly   330 SRVGVAVLNGKLYAFGGFNGTERLSTVEVY 359
            |...|..|...:...||     |:::.:|:
Zfish   354 SEYAVCALRNDILVSGG-----RINSRDVW 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_001262494.1 BTB 29..135 CDD:279045 44/105 (42%)
PHA03098 36..510 CDD:222983 121/326 (37%)
BACK 143..245 CDD:285009 43/101 (43%)
Kelch 292..339 CDD:128874 15/48 (31%)
KELCH repeat 329..372 CDD:276965 7/31 (23%)
Kelch 340..386 CDD:128874 4/20 (20%)
KELCH repeat 376..417 CDD:276965
Kelch 387..433 CDD:128874
KELCH repeat 423..466 CDD:276965
Kelch 435..480 CDD:128874
Kelch_1 469..514 CDD:279660
KELCH repeat 470..514 CDD:276965
Kelch_1 517..560 CDD:279660
KELCH repeat 517..560 CDD:276965
klhl24bNP_956734.1 BTB 56..159 CDD:279045 43/104 (41%)
BTB 67..163 CDD:197585 42/97 (43%)
BACK 168..270 CDD:285009 43/101 (43%)
Kelch 314..363 CDD:128874 15/48 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X9
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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