DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and ivns1abpa

DIOPT Version :9

Sequence 1:NP_001262494.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_954973.2 Gene:ivns1abpa / 387591 ZFINID:ZDB-GENE-031222-2 Length:643 Species:Danio rerio


Alignment Length:644 Identity:173/644 - (26%)
Similarity:288/644 - (44%) Gaps:98/644 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VEDQYFVYKHDKLFGESFPLFKEIRRMGKLCDVTLKVEDQTFSAHRVVLAATIPYFYAMFTNNMA 73
            :.:.|.:::.:.....:......:|:.|:.|||.|:|......|||.|||...||.:.:|.:::.
Zfish     2 IPNGYLIFEDESFLDSTVAKMNALRKNGQFCDVRLQVCGHELMAHRAVLACCSPYLFEIFNSDLE 66

  Fly    74 ESRIKEITMKESAIEPSALESLINYVYSGQVRIDNQNVQNLMVGASFLQLSNVRDACASFLISRF 138
            ...|..:..::  ::|.|:|.|:||.|:.|::.|.:.|:.:...|..|::..|:..|..:|:|:.
Zfish    67 PHGISHVKFED--LDPEAVEILLNYAYTAQLKADKELVKEVYSAAKRLKMDRVKQICGDYLLSKM 129

  Fly   139 HPHNVLGIRTFADSMICRQLIDAADKYIDQNFAKVSQSEEFLALDCEQLLELMRRDELNVRTEEV 203
            ...:.:..|.||..|...:|:...|.||.::..:||:.|:||.|. ...||:|..|.|.:.:...
Zfish   130 DSQSAISYRNFASCMGDGRLLGKIDSYIQEHLLEVSEQEDFLKLP-RLKLEVMLEDNLTLPSNGK 193

  Fly   204 IFEACMKWVKYAEDKRSELFPQVLAAVRLPLLSP------------------------QFLADRV 244
            ::...:.||:.:..:..|...:::..|:....|.                        ||:..:.
Zfish   194 LYSKVIGWVQRSLWENGEPLERLMEEVQTLYYSADHKLLDGSLLDGQAEVFGTEDDHIQFVQKKP 258

  Fly   245 AREELIR--------------SSHQCRD------------------------------------- 258
            .||.:.|              :.|.|:.                                     
Zfish   259 PRENVHRQLSTSSSGSLSPGSTKHPCKQEWKYIASEKTTNNTYLCLAVLNGMLCVIFLHGRSSPQ 323

  Fly   259 -------LLDEAKDFHLMP--ERRGLLQSFRTRQRSG---EFFTGQIYAVGGLASTGESVSTVEI 311
                   .|.::..|...|  |....|.|.....|||   .....|:.|.||. :..|.:.|||.
Zfish   324 ASPSATPCLTKSLSFEGQPLEEEPDKLLSPMHYARSGLGIASLNDQLIAAGGY-NREECLRTVEC 387

  Fly   312 YDPLTKKWKMGEQMSMMRSRVGVAVLNGKLYAFGGFNG-TERLSTVEVYDPRKNKWSQGCAMLCK 375
            |:..|..|.....|...|:|..:|||.|:||..||.|| ::.||..|.|:|..::|:|...:...
Zfish   388 YNIKTNSWTFIAPMRTPRARFQMAVLMGQLYVMGGSNGHSDELSCGETYNPNADEWTQVPELRTN 452

  Fly   376 RSAVGVAALDDCIYVCGGYD--GVTSLNTVEVYYPKSNTWKTVAQMMKYRSAGGVTQLNGYVYAL 438
            |...||.:|::.:||.||.|  |...|...:|:.|.|..|...|.:...|....|.:|:|::|.:
Zfish   453 RCNAGVCSLNNKLYVVGGSDPCGQKGLKNCDVFDPISKAWTNCAPLNIRRHQAAVCELDGFMYVI 517

  Fly   439 GGHDGLSIFDSVERYDQAEDVWVKMSPMLNRRCRLGVATLNGKIYVCGGYCGNSFLRSVECYDPQ 503
            ||.:..:..:|||||:...:.|..::.|...|...|||...||::|.||:.|:..||.||.|||.
Zfish   518 GGAESWNCLNSVERYNPENNTWTLIASMNIARRGAGVAVYEGKLFVVGGFDGSHALRCVEMYDPV 582

  Fly   504 TDTWKLVTPMNCKRSRVALAANMGKLWAIGGYDGESNLSTVEVYDPETDKWTFMPPMCA 562
            .:.|:::..||..||....|.....::||||:||...|::||.|:|:|::|:    .||
Zfish   583 RNEWRMLGSMNSPRSNAGAAVLNDVIYAIGGFDGNDFLNSVEAYNPKTEEWS----TCA 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_001262494.1 BTB 29..135 CDD:279045 31/105 (30%)
PHA03098 36..510 CDD:222983 151/563 (27%)
BACK 143..245 CDD:285009 26/125 (21%)
Kelch 292..339 CDD:128874 17/46 (37%)
KELCH repeat 329..372 CDD:276965 19/43 (44%)
Kelch 340..386 CDD:128874 17/46 (37%)
KELCH repeat 376..417 CDD:276965 15/42 (36%)
Kelch 387..433 CDD:128874 15/47 (32%)
KELCH repeat 423..466 CDD:276965 13/42 (31%)
Kelch 435..480 CDD:128874 14/44 (32%)
Kelch_1 469..514 CDD:279660 18/44 (41%)
KELCH repeat 470..514 CDD:276965 18/43 (42%)
Kelch_1 517..560 CDD:279660 16/42 (38%)
KELCH repeat 517..560 CDD:276965 16/42 (38%)
ivns1abpaNP_954973.2 BTB 23..634 CDD:333434 169/614 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..282 3/24 (13%)
KELCH repeat 358..401 CDD:276965 14/43 (33%)
Kelch 1 369..415 17/46 (37%)
KELCH repeat 405..450 CDD:276965 19/44 (43%)
Kelch 2 416..463 17/46 (37%)
KELCH repeat 453..498 CDD:276965 16/44 (36%)
Kelch 3 465..512 15/46 (33%)
KELCH repeat 502..545 CDD:276965 13/42 (31%)
Kelch 4 513..559 14/45 (31%)
KELCH repeat 549..593 CDD:276965 18/43 (42%)
Kelch 5 560..606 18/45 (40%)
KELCH repeat 596..638 CDD:276965 18/46 (39%)
Kelch 6 608..643 15/34 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4441
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D312716at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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