DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT1G61230

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_176318.3 Gene:AT1G61230 / 3767595 AraportID:AT1G61230 Length:505 Species:Arabidopsis thaliana


Alignment Length:204 Identity:45/204 - (22%)
Similarity:76/204 - (37%) Gaps:69/204 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   400 LNTVEVYYPKSNTWKTVAQMMKYRSAGGVTQLNGYVYALGGHDGLSIFDSV----ERYDQAED-- 458
            |.:||.||..:..:   .|.:::::...|::|.|  |..|....||:...:    ..|.::::  
plant    13 LESVESYYDDAPCY---IQALQFKTNFKVSELIG--YGKGTKFSLSVKGKIIIGFHGYIKSQNNP 72

  Fly   459 ---------VWVKMSPMLNRRCRL-------GVATLNG-------KIYVCGGYCGNSFLR----- 495
                     .|:.       .|||       |:...:|       ||:|.||:.|..:::     
plant    73 LVKSLGAYFTWIP-------DCRLEAKGSKGGIQWDDGADHEGITKIHVRGGFEGIQYIKFDYVK 130

  Fly   496 -------SV----ECY--DPQTDTWKLVTPMNCKRSRVALAANMGKLWAIG-------GYDG--E 538
                   ||    |.|  |..|....|....|.|.|.: |....||.:::.       |:.|  |
plant   131 SGQPKIGSVHGLSEGYYDDESTAIQALQFKTNIKTSEL-LGYEKGKKFSLADKGKKIIGFHGYAE 194

  Fly   539 SNLSTVEVY 547
            .||.::..|
plant   195 KNLISLGAY 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556
PHA03098 36..510 CDD:222983 32/156 (21%)
KELCH repeat 329..372 CDD:276965
KELCH repeat 376..417 CDD:276965 5/16 (31%)
KELCH repeat 423..466 CDD:276965 9/57 (16%)
KELCH repeat 470..514 CDD:276965 18/75 (24%)
Kelch_1 517..560 CDD:396078 10/40 (25%)
KELCH repeat 517..560 CDD:276965 10/40 (25%)
AT1G61230NP_176318.3 Jacalin <4..83 CDD:214909 14/74 (19%)
Jacalin 97..206 CDD:214909 27/108 (25%)
Jacalin 222..351 CDD:214909
Jacalin 370..502 CDD:396138
Blue background indicates that the domain is not in the aligned region.

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