DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KLHL18 and KLHL38

DIOPT Version :9

Sequence 1:NP_001262494.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_001075144.2 Gene:KLHL38 / 340359 HGNCID:34435 Length:581 Species:Homo sapiens


Alignment Length:559 Identity:154/559 - (27%)
Similarity:247/559 - (44%) Gaps:94/559 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LFKE-------------IRRMGKLCDVTLKVEDQTFSAHRVVLAATIPYFYAMFTNNMAESRIKE 79
            |||:             :|:...|.||::....:....||.|||::.|||.|||.::..|....:
Human    10 LFKDHDFSSDLLRQLNSLRQSRILTDVSICAGAREIPCHRNVLASSSPYFRAMFCSSFREKSEAK 74

  Fly    80 ITMKESAIEPSALESLINYVYSGQVRIDNQNVQNLMVGASFLQLSNVRDACASFLISRFHPHNVL 144
            :.:|  .|:|..|:.:::|||:|:..|...||..:|..||.||...:.:||:|:|.|:..|.|.|
Human    75 VQLK--GIDPPTLDQIVSYVYTGEAHIATDNVLPVMEAASMLQFPKLFEACSSYLQSQLAPSNCL 137

  Fly   145 GIRTFADSMICRQLIDAADKYIDQNFAKVSQSEEFLALDCEQLLELMRRDELN----VRTEEVIF 205
            |:...::.:.|..|...|.:....:|.:|:.|     .|.::|..|..||.|.    ...||.:|
Human   138 GMIRLSEILSCETLKKKAREVALTSFPEVAAS-----ADLKELCALELRDYLGDDGLCGEEEKVF 197

  Fly   206 EACMKWVKYAEDKRSELFPQVLAAVRLPLLSPQFLADRVAREELIRSSHQCRDLLDEAKD----- 265
            ||.|.|:|:....|.....::...|||..:.|.|....:|.:.|::||..|:.:|:.||.     
Human   198 EALMVWIKHDLQARKRYMQELFKQVRLQYIHPAFFHHFIANDALLQSSPACQIILETAKRQMFSL 262

  Fly   266 -----------FHLMPERRGLLQSF--------RTRQRSGEFF-----TGQ-------------- 292
                       .|:.|  |...|.|        .::|.:.:..     |||              
Human   263 CGTTVPDCKLLLHVPP--RNSYQDFLILLGGRKDSQQTTRDVLLYSKQTGQWQSLAKLPTRLYKA 325

  Fly   293 --------IYAVGGLA-STGESV--STVEIYDPLTKKWKMGEQMSMMRSRVGVAVLNGKLYAFGG 346
                    ||.:||:| |:|.|:  ..|.|:.....:|::||.|.:.|...........:::.||
Human   326 SAITLHRSIYVLGGMAVSSGRSLVSHNVYIFSLKLNQWRLGEPMLVARYSHRSTAHKNFIFSIGG 390

  Fly   347 F-NGTERLSTVEVYDPRKNKWSQGCAMLCKRSAVGVAALDDCIYVCGGYDGVTS-LNTVEVYYPK 409
            . .|.|.:.::|.||...|.|....:|........||..|..:|:.||.|.:.: :..::||:..
Human   391 IGEGQELMGSMERYDSICNVWESMASMPVGVLHPAVAVKDQRLYLFGGEDIMQNPVRLIQVYHIS 455

  Fly   410 SNTW-KTVAQMMKYRSAGGVTQLNGYVYALGGHDGLSIFDSVERYDQAEDVWVKMSPMLNRRCRL 473
            .|:| |...:|:|...|..|. |...:..:||:.     ..:..||...:.:||.:.|.:||...
Human   456 RNSWFKMETRMIKNVCAPAVV-LGERIVIVGGYT-----RRILAYDPQSNKFVKCADMKDRRMHH 514

  Fly   474 GVATLNGKIYVCGGY-----CGNSFLRSVECYDPQTDTW 507
            |...:..|:||.||.     |......|.:||||:||||
Human   515 GATVMGNKLYVTGGRRLTTDCNIEDSASFDCYDPETDTW 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_001262494.1 BTB 29..135 CDD:279045 37/118 (31%)
PHA03098 36..510 CDD:222983 150/538 (28%)
BACK 143..245 CDD:285009 28/105 (27%)
Kelch 292..339 CDD:128874 16/71 (23%)
KELCH repeat 329..372 CDD:276965 10/43 (23%)
Kelch 340..386 CDD:128874 12/46 (26%)
KELCH repeat 376..417 CDD:276965 12/42 (29%)
Kelch 387..433 CDD:128874 14/47 (30%)
KELCH repeat 423..466 CDD:276965 9/42 (21%)
Kelch 435..480 CDD:128874 10/44 (23%)
Kelch_1 469..514 CDD:279660 18/44 (41%)
KELCH repeat 470..514 CDD:276965 17/43 (40%)
Kelch_1 517..560 CDD:279660
KELCH repeat 517..560 CDD:276965
KLHL38NP_001075144.2 BTB 24..128 CDD:279045 35/105 (33%)
PHA03098 30..560 CDD:222983 150/539 (28%)
BACK 136..237 CDD:285009 28/105 (27%)
Kelch_6 281..321 CDD:290672 6/39 (15%)
Kelch 1 285..332 5/46 (11%)
KELCH repeat 325..369 CDD:276965 13/43 (30%)
Kelch 334..383 CDD:128874 15/48 (31%)
Kelch 2 334..383 15/48 (31%)
Kelch_1 372..418 CDD:279660 10/45 (22%)
KELCH repeat 373..417 CDD:276965 10/43 (23%)
Kelch 3 384..431 12/46 (26%)
KELCH repeat 421..508 CDD:276965 23/92 (25%)
Kelch 4 433..479 14/46 (30%)
Kelch 480..521 CDD:128874 10/45 (22%)
Kelch 5 480..521 10/45 (22%)
Kelch_1 510..560 CDD:279660 18/44 (41%)
KELCH repeat 511..561 CDD:276965 17/43 (40%)
Kelch 6 523..573 14/31 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.