DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KLHL18 and klhl18

DIOPT Version :9

Sequence 1:NP_001262494.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_956124.1 Gene:klhl18 / 327574 ZFINID:ZDB-GENE-030131-5785 Length:576 Species:Danio rerio


Alignment Length:577 Identity:304/577 - (52%)
Similarity:409/577 - (70%) Gaps:5/577 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDLSDN--SQVEDQYFVYKHDKLFGESFPLFKEIRRMGKLCDVTLKVEDQTFSAHRVVLAATIPY 63
            |.:.|.  .::||.......| |....:.:.:||||.||||||||||.:..|||||:||||:|||
Zfish     1 MTMGDTIFEELEDLMHFSVAD-LPARGYAVMEEIRRQGKLCDVTLKVGEHKFSAHRIVLAASIPY 64

  Fly    64 FYAMFTNNMAESRIKEITMKESAIEPSALESLINYVYSGQVRIDNQNVQNLMVGASFLQLSNVRD 128
            |:|||||:|.|.:..||.|:  .::|||||:|||:.|:|.:.||.||||.|::|||||||.||:|
Zfish    65 FHAMFTNDMVECKQDEIVMQ--GMDPSALEALINFAYNGHIAIDQQNVQALLIGASFLQLQNVKD 127

  Fly   129 ACASFLISRFHPHNVLGIRTFADSMICRQLIDAADKYIDQNFAKVSQSEEFLALDCEQLLELMRR 193
            ||.|||..|.||.|.||:|.||::|:|..|.|||:.::.|:|.:||.|||||||..|::|||:..
Zfish   128 ACCSFLQQRLHPKNCLGVRQFAETMMCTTLYDAANSFVHQHFVEVSVSEEFLALRPEEVLELVGC 192

  Fly   194 DELNVRTEEVIFEACMKWVKYAEDKRSELFPQVLAAVRLPLLSPQFLADRVAREELIRSSHQCRD 258
            |||||:.||.:|||.:.||::..|.|....|::|:.:||||..||||||||.::||:|..|:|||
Zfish   193 DELNVQAEEQVFEAVLAWVRHERDDRESRLPELLSKIRLPLCRPQFLADRVQQDELVRCCHKCRD 257

  Fly   259 LLDEAKDFHLMPERRGLLQSFRTRQRSGEFFTGQIYAVGGLASTGESVSTVEIYDPLTKKWKMGE 323
            |:|||||:|||||||..|.:::||||......|.|||||||.|.|:|::.||::||:...|:..:
Zfish   258 LVDEAKDYHLMPERRPHLPAYKTRQRCCTSIAGLIYAVGGLNSAGDSLNVVEVFDPIGNCWERCQ 322

  Fly   324 QMSMMRSRVGVAVLNGKLYAFGGFNGTERLSTVEVYDPRKNKWSQGCAMLCKRSAVGVAALDDCI 388
            .||..||||||||:||.|||.||::|..||.|||||:|..:.|::..:|..:|||:|...:|..|
Zfish   323 PMSTARSRVGVAVVNGLLYAIGGYDGQSRLRTVEVYNPDTDTWTKVASMNTQRSAMGTVVVDGHI 387

  Fly   389 YVCGGYDGVTSLNTVEVYYPKSNTWKTVAQMMKYRSAGGVTQLNGYVYALGGHDGLSIFDSVERY 453
            ||||||||.:|||:||.|.|:::.|..|.:|...|||.|||...|.:|..||||||.||:::|.|
Zfish   388 YVCGGYDGKSSLNSVECYAPETDRWTIVTEMSASRSAAGVTVFEGRIYVSGGHDGLQIFNTMEYY 452

  Fly   454 DQAEDVWVKMSPMLNRRCRLGVATLNGKIYVCGGYCGNSFLRSVECYDPQTDTWKLVTPMNCKRS 518
            :|....|..::||:|:|||.|.|.|...:||.|||.|::||...|.|....|.|..:..||.:||
Zfish   453 NQHTASWHLVAPMINKRCRHGAAALGSNLYVAGGYDGSAFLSGAEVYSSVADQWSHLVAMNTRRS 517

  Fly   519 RVALAANMGKLWAIGGYDGESNLSTVEVYDPETDKWTFMPPMCAHSGGVGAGVIRIE 575
            |::|.||.|:|:|:|||||:||||::|:||.||::||||.||..|.||||.|.:.::
Zfish   518 RISLVANCGRLYAVGGYDGQSNLSSLEMYDQETNRWTFMAPMVCHEGGVGVGCVPLQ 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_001262494.1 BTB 29..135 CDD:279045 68/105 (65%)
PHA03098 36..510 CDD:222983 257/473 (54%)
BACK 143..245 CDD:285009 53/101 (52%)
Kelch 292..339 CDD:128874 25/46 (54%)
KELCH repeat 329..372 CDD:276965 25/42 (60%)
Kelch 340..386 CDD:128874 20/45 (44%)
KELCH repeat 376..417 CDD:276965 22/40 (55%)
Kelch 387..433 CDD:128874 25/45 (56%)
KELCH repeat 423..466 CDD:276965 20/42 (48%)
Kelch 435..480 CDD:128874 22/44 (50%)
Kelch_1 469..514 CDD:279660 18/44 (41%)
KELCH repeat 470..514 CDD:276965 18/43 (42%)
Kelch_1 517..560 CDD:279660 27/42 (64%)
KELCH repeat 517..560 CDD:276965 27/42 (64%)
klhl18NP_956124.1 BTB 30..134 CDD:279045 68/105 (65%)
PHA03098 36..507 CDD:222983 256/472 (54%)
BACK 142..244 CDD:285009 53/101 (52%)
KELCH repeat 284..324 CDD:276965 16/39 (41%)
Kelch 291..338 CDD:128874 25/46 (54%)
KELCH repeat 328..371 CDD:276965 25/42 (60%)
Kelch 339..385 CDD:128874 20/45 (44%)
KELCH repeat 375..419 CDD:276965 23/43 (53%)
Kelch 386..432 CDD:128874 25/45 (56%)
KELCH repeat 422..465 CDD:276965 20/42 (48%)
Kelch 433..478 CDD:128874 21/44 (48%)
Kelch_1 469..513 CDD:279660 18/43 (42%)
KELCH repeat 469..513 CDD:276965 18/43 (42%)
Kelch_1 515..559 CDD:279660 27/43 (63%)
KELCH repeat 516..559 CDD:276965 27/42 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594057
Domainoid 1 1.000 142 1.000 Domainoid score I4637
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H14805
Inparanoid 1 1.050 624 1.000 Inparanoid score I844
OMA 1 1.010 - - QHG59391
OrthoDB 1 1.010 - - D312716at33208
OrthoFinder 1 1.000 - - FOG0000036
OrthoInspector 1 1.000 - - oto41307
orthoMCL 1 0.900 - - OOG6_108344
Panther 1 1.100 - - LDO PTHR24412
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3508
SonicParanoid 1 1.000 - - X9
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1514.940

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