DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and CG17754

DIOPT Version :9

Sequence 1:NP_001262494.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_572549.2 Gene:CG17754 / 31873 FlyBaseID:FBgn0030114 Length:654 Species:Drosophila melanogaster


Alignment Length:581 Identity:212/581 - (36%)
Similarity:315/581 - (54%) Gaps:36/581 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 EDQYF--------VYKHDKLFGESFPLFKEIRRMGKLCDVTL--KVEDQTFSAHRVVLAATIPYF 64
            :|::|        :.|..:|:.:|          .:||||.|  .::.:...|||:||:|:..||
  Fly    48 QDEFFRCRDHADNILKRMQLYVDS----------QQLCDVVLIAGIDGKRVPAHRLVLSASSAYF 102

  Fly    65 YAMFTNNMAESRIKEITMKESAIEPSALESLINYVYSGQVRIDNQNVQNLMVGASFLQLSNVRDA 129
            .||||.::.|::.:|:|:.|  :...||..|:.|.|:|.:.:....|:.|:..|..|||:.|..|
  Fly   103 SAMFTGSLRETKEQEVTLGE--VHGDALHLLVQYCYTGFIEMREDTVETLLATACLLQLNAVVTA 165

  Fly   130 CASFLISRFHPHNVLGIRTFADSMICRQLIDAADKYIDQNFAKVSQSEEFLALDCEQLLELMRRD 194
            |.:||..:.||.|.||...||:...|..|:..|..|..|.|.:|.|::||..|:.:||.:|:..|
  Fly   166 CCNFLARQLHPSNCLGFAFFAEQQSCTTLLRLAQAYTCQYFMQVCQNQEFFQLNADQLGKLLSSD 230

  Fly   195 ELNVRTEEVIFEACMKWVKYAEDKRSELFPQVLAAVRLPLLSPQFLADRVAREELIRSSHQCRDL 259
            :|||.:|:.:|.:.|.||::....|.:..|::||.||||||.|.|:.|.|   |.:.::::|:.|
  Fly   231 DLNVPSEQDVFHSLMSWVRHDSAAREQHIPELLALVRLPLLQPAFIMDHV---ENVCNANECQQL 292

  Fly   260 LDEAKDFHLMPERRGLLQSFRTRQRSGEFFTGQIYAVGGLASTGESVSTVEIYDPLTKKWKMGEQ 324
            :.||..:|||||||..:.:.||..|...  .|::.||||:.:...::| :|.|.|...||...:.
  Fly   293 VMEAFKWHLMPERRSRIATERTTPRKST--VGRLLAVGGMDAHKGAIS-IESYCPRLDKWTPWKH 354

  Fly   325 MSMMRSRVGVAVLNGKLYAFGGFNGTERLSTVEVYDPRKNKWSQGCAMLCKRSAVGVAALDDCIY 389
            |:..|.:.|.||:..||...||.:|.:.|:|||..|.....|:...||...|..:|||.|:..:|
  Fly   355 MTGRRLQFGAAVMEDKLILVGGRDGLKTLNTVESLDLNTMAWAPLNAMATPRHGLGVAVLEGPLY 419

  Fly   390 VCGGYDGVTSLNTVEVYYPKSNTWKTVAQMMKYRSAGGVTQLNGYVYALGGHDGLSIFDSVERYD 454
            ..||:||.:.|||||.:.|.:.||..||.|...||..||..|.|.:||:||.||.....|:|.||
  Fly   420 AVGGHDGWSYLNTVERWDPIARTWSYVAPMSSMRSTAGVAVLGGRLYAVGGRDGSVCHRSIECYD 484

  Fly   455 QAEDVWVKMSPMLNRRCRLGVATLNGKIYVCGGY---CGNSFL---RSVECYDPQTDTWKLVTPM 513
            ...:.|..::||..||..:||...||.:|..||:   ..|..:   .:||.|||.||||.|:..:
  Fly   485 PHTNKWSLLAPMNRRRGGVGVTVANGFLYALGGHDCPASNPMVCRTETVERYDPATDTWTLICSL 549

  Fly   514 NCKRSRVALAANMGKLWAIGGYDGESNLSTVEVYDPETDKWTFMPPMCAHSGGVGAGVIRI 574
            ...|..:..|....:|..:|||||...|.:||.|||..:.|..:.||.  ....||.|:.|
  Fly   550 ALGRDAIGCALLGDRLIVVGGYDGNHALKSVEEYDPVRNGWNELAPMA--FARAGACVVAI 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_001262494.1 BTB 29..135 CDD:279045 37/107 (35%)
PHA03098 36..510 CDD:222983 185/481 (38%)
BACK 143..245 CDD:285009 40/101 (40%)
Kelch 292..339 CDD:128874 15/46 (33%)
KELCH repeat 329..372 CDD:276965 15/42 (36%)
Kelch 340..386 CDD:128874 18/45 (40%)
KELCH repeat 376..417 CDD:276965 18/40 (45%)
Kelch 387..433 CDD:128874 21/45 (47%)
KELCH repeat 423..466 CDD:276965 17/42 (40%)
Kelch 435..480 CDD:128874 17/44 (39%)
Kelch_1 469..514 CDD:279660 20/50 (40%)
KELCH repeat 470..514 CDD:276965 19/49 (39%)
Kelch_1 517..560 CDD:279660 15/42 (36%)
KELCH repeat 517..560 CDD:276965 15/42 (36%)
CG17754NP_572549.2 BTB 70..170 CDD:279045 37/111 (33%)
PHA03098 71..591 CDD:222983 201/537 (37%)
BACK 179..281 CDD:285009 41/104 (39%)
Kelch 323..369 CDD:128874 15/46 (33%)
KELCH repeat 359..402 CDD:276965 15/42 (36%)
Kelch 370..416 CDD:128874 18/45 (40%)
KELCH repeat 406..449 CDD:276965 20/42 (48%)
Kelch 418..463 CDD:128874 21/44 (48%)
KELCH repeat 453..497 CDD:276965 18/43 (42%)
Kelch 464..510 CDD:128874 17/45 (38%)
Kelch_1 499..546 CDD:279660 19/46 (41%)
KELCH repeat 500..549 CDD:276965 19/48 (40%)
KELCH repeat 553..596 CDD:276965 15/42 (36%)
Kelch 564..610 CDD:128874 19/47 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464368
Domainoid 1 1.000 52 1.000 Domainoid score I4252
eggNOG 1 0.900 - - E1_KOG4441
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 57 1.000 Inparanoid score I2576
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D26788at33392
OrthoFinder 1 1.000 - - FOG0000036
OrthoInspector 1 1.000 - - otm2846
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24412
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X9
109.900

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