DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and Klhl30

DIOPT Version :9

Sequence 1:NP_001262494.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:XP_003750781.1 Gene:Klhl30 / 316624 RGDID:1309644 Length:581 Species:Rattus norvegicus


Alignment Length:559 Identity:160/559 - (28%)
Similarity:244/559 - (43%) Gaps:99/559 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 YKHDKLFGESFPLFKEIRRMGKLCDVTLKVEDQTFSAHRVVLAATIPYFYAMFTNNMAESRIKEI 80
            :..|.|.|     .:.:|.:.||.||||.|.||....||.:||...|||:|||..:.|||....:
  Rat    15 HAQDMLEG-----LQRLRSLPKLADVTLLVGDQELPCHRSLLALNSPYFHAMFAGDFAESFSARV 74

  Fly    81 TMKESAIEPSALESLINYVYSGQVRIDNQNVQNLMVGASFLQLSNVRDACASFLISRFHPHNVLG 145
            .:::  :||:|:..|:::||:|::.|...||:.|...||.|....|:..|..:|..:....|.||
  Rat    75 ELRD--VEPAAVGQLVDFVYTGRLTITQSNVEALTRSASRLHFPTVQKVCGRYLQQQLDATNCLG 137

  Fly   146 IRTFADSMICRQLIDAADK---YIDQNFAKVSQSEEFLALDCEQLLELMRRDELNVRTEEVIFEA 207
            |..|.:.   :.|:..|.|   ::.:||..|:|.:|||.|..::|...:..|.|.|:.|:...||
  Rat   138 ICEFGEQ---QGLLGVAAKAWAFLRENFEAVAQEDEFLQLPRDRLATCLASDLLQVQPEQSRLEA 199

  Fly   208 CMKWVKYAEDKRSELFPQVLAAVRLPLLSPQFLADRVAREELIRSSHQCRDLLDEAKDFHLMPER 272
            .::||::....|:...|::|..|.|..|....:...:|.|.||:.|..|::.|.:...    .|.
  Rat   200 LLRWVRHDPQDRAAYLPELLNLVHLDALPRPCVQQLLATEPLIQESEACQEALSQGHS----AEP 260

  Fly   273 RGLLQSFRTRQRSGEFFTGQIYAVGGLA-----STGESVS----TVEIYDPLTKKWKMGEQMSMM 328
            .||.|..:.          .:..|||.|     ..||..|    ....|:...::|         
  Rat   261 PGLPQKMQE----------VLVVVGGRALEEDEEGGEEPSPHTGNFAFYNTKARQW--------- 306

  Fly   329 RSRVGVAVLNGKLYAFGGFNGTERLSTVEVYDPRKNKWSQGCAMLCKRSAVGVAALDDCIYVCGG 393
                         .|...|             |..:||           ...:|.|:..:||.||
  Rat   307 -------------MALPDF-------------PDYHKW-----------GFSLATLNSDVYVTGG 334

  Fly   394 YDG--VTSLNTVEVY-YP-KSNTWKTVAQMMKYRSAGGVTQLNGYVYALGGHDGLSIFDS--VER 452
            ..|  ..:.:|.:.: :| |...||.||.|:|.|:....|.|||.:||:||    :..|:  |||
  Rat   335 SRGTKTDTWSTTQAWCFPLKEAVWKPVAPMLKARTNHASTALNGEIYAIGG----TALDAVEVER 395

  Fly   453 YDQAEDVWVKMSPMLNRRCRLGVATLNGKIYVCGGYCGNSFLRSVECYDPQTDTWKLV-TPMNCK 516
            ||...|.|..:.|.|........|:..|::|:.|.......:.:::||.|.||.|.:: :|...|
  Rat   396 YDPYTDSWAPVRPALKYVSNFSAASCQGRLYLVGSSACKYNMLALQCYSPVTDVWSVIASPFLPK 460

  Fly   517 -RSRVALAANMGKLWAIGGYDGESNLSTVEVYDPETDKW 554
             .|....||..|.|:.||     .|...|.||||..:.|
  Rat   461 YLSSPRCAALNGALYLIG-----DNTKKVYVYDPGANLW 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_001262494.1 BTB 29..135 CDD:279045 39/105 (37%)
PHA03098 36..510 CDD:222983 140/491 (29%)
BACK 143..245 CDD:285009 30/104 (29%)
Kelch 292..339 CDD:128874 9/55 (16%)
KELCH repeat 329..372 CDD:276965 5/42 (12%)
Kelch 340..386 CDD:128874 7/45 (16%)
KELCH repeat 376..417 CDD:276965 12/44 (27%)
Kelch 387..433 CDD:128874 17/49 (35%)
KELCH repeat 423..466 CDD:276965 17/44 (39%)
Kelch 435..480 CDD:128874 15/46 (33%)
Kelch_1 469..514 CDD:279660 11/45 (24%)
KELCH repeat 470..514 CDD:276965 11/44 (25%)
Kelch_1 517..560 CDD:279660 14/38 (37%)
KELCH repeat 517..560 CDD:276965 14/38 (37%)
Klhl30XP_003750781.1 BTB_POZ 1..137 CDD:365784 44/128 (34%)
PHA03098 29..494 CDD:222983 155/538 (29%)
BACK_KLHL30 128..231 CDD:350544 31/105 (30%)
KELCH repeat 319..364 CDD:276965 14/44 (32%)
KELCH repeat 368..410 CDD:276965 18/45 (40%)
KELCH repeat 413..455 CDD:276965 10/41 (24%)
KELCH repeat 462..499 CDD:276965 14/38 (37%)
KELCH repeat 504..551 CDD:276965
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4441
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000036
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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