DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KLHL18 and Klhl18

DIOPT Version :9

Sequence 1:NP_001262494.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:XP_006244067.1 Gene:Klhl18 / 316012 RGDID:1310570 Length:579 Species:Rattus norvegicus


Alignment Length:575 Identity:305/575 - (53%)
Similarity:409/575 - (71%) Gaps:7/575 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LSDNSQVEDQYFVYKHDKLFGESFPLFKEIRRMGKLCDVTLKVEDQTFSAHRVVLAATIPYFYAM 67
            :.|.::..:....:...:|....:.:.:||||.|||||||||:.|..|||||:||||:||||:||
  Rat     2 VEDGAEELEDLVHFSVSELPSRGYGVMEEIRRQGKLCDVTLKIGDHKFSAHRIVLAASIPYFHAM 66

  Fly    68 FTNNMAESRIKEITMKESAIEPSALESLINYVYSGQVRIDNQNVQNLMVGASFLQLSNVRDACAS 132
            |||:|.|.:..||.|:  .::|||||:|||:.|:|.:.||.||||:|::|||||||.:::|||.:
  Rat    67 FTNDMMECKQDEIVMQ--GMDPSALEALINFAYNGNLAIDQQNVQSLLMGASFLQLQSIKDACCT 129

  Fly   133 FLISRFHPHNVLGIRTFADSMICRQLIDAADKYIDQNFAKVSQSEEFLALDCEQLLELMRRDELN 197
            ||..|.||.|.||:|.||::|:|..|.|||:.:|.|:|.:||.|||||||..|.:|||:.|||||
  Rat   130 FLRERLHPKNCLGVRQFAETMMCAVLYDAANSFIHQHFVEVSLSEEFLALPLEDVLELLSRDELN 194

  Fly   198 VRTEEVIFEACMKWVKYAEDKRSELFPQVLAAVRLPLLSPQFLADRVAREELIRSSHQCRDLLDE 262
            |::||.:|||.:.|::|..::|....|::|:.:||||..||||:|||.:::|:|..|:||||:||
  Rat   195 VKSEEQVFEAALAWIRYDREQRGPCLPELLSNIRLPLCRPQFLSDRVQQDDLVRCCHKCRDLVDE 259

  Fly   263 AKDFHLMPERRGLLQSFRTRQRSGEFFTGQIYAVGGLAS-----TGESVSTVEIYDPLTKKWKMG 322
            |||:|||||||..|.:||||.|......|.|||||||.|     .|:|::.||::||:..:|:..
  Rat   260 AKDYHLMPERRPHLPAFRTRPRCCTSIAGLIYAVGGLNSAANFYAGDSLNVVEVFDPIANRWEKC 324

  Fly   323 EQMSMMRSRVGVAVLNGKLYAFGGFNGTERLSTVEVYDPRKNKWSQGCAMLCKRSAVGVAALDDC 387
            ..|:..||||||||:||.|||.||::|..||||||.|:|..:.|::..:|..||||:|...||..
  Rat   325 HPMTTARSRVGVAVVNGLLYAIGGYDGQLRLSTVEAYNPETDTWTRVGSMNSKRSAMGTVVLDGQ 389

  Fly   388 IYVCGGYDGVTSLNTVEVYYPKSNTWKTVAQMMKYRSAGGVTQLNGYVYALGGHDGLSIFDSVER 452
            |||||||||.:|||:||.|.|:::.|..|..|...|||.|||...|.:|..||||||.||.|||:
  Rat   390 IYVCGGYDGNSSLNSVETYSPETDKWTVVTPMSSNRSAAGVTVFEGRIYVSGGHDGLQIFSSVEQ 454

  Fly   453 YDQAEDVWVKMSPMLNRRCRLGVATLNGKIYVCGGYCGNSFLRSVECYDPQTDTWKLVTPMNCKR 517
            |:.....|...:.|||:|||.|.|:|..|::|||||.|:.||...|.|....|.|.|:.||:.:|
  Rat   455 YNHHTATWHPAASMLNKRCRHGAASLGSKMFVCGGYDGSGFLSIAEMYSSVADQWCLIVPMHTRR 519

  Fly   518 SRVALAANMGKLWAIGGYDGESNLSTVEVYDPETDKWTFMPPMCAHSGGVGAGVI 572
            |||:|.|:.|:|:|:|||||:||||:||:||||||:||||.||..|.||||.|.|
  Rat   520 SRVSLVASCGRLYAVGGYDGQSNLSSVEMYDPETDRWTFMAPMACHEGGVGVGCI 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_001262494.1 BTB 29..135 CDD:279045 65/105 (62%)
PHA03098 36..510 CDD:222983 257/478 (54%)
BACK 143..245 CDD:285009 53/101 (52%)
Kelch 292..339 CDD:128874 24/51 (47%)
KELCH repeat 329..372 CDD:276965 25/42 (60%)
Kelch 340..386 CDD:128874 22/45 (49%)
KELCH repeat 376..417 CDD:276965 23/40 (58%)
Kelch 387..433 CDD:128874 25/45 (56%)
KELCH repeat 423..466 CDD:276965 21/42 (50%)
Kelch 435..480 CDD:128874 23/44 (52%)
Kelch_1 469..514 CDD:279660 21/44 (48%)
KELCH repeat 470..514 CDD:276965 21/43 (49%)
Kelch_1 517..560 CDD:279660 30/42 (71%)
KELCH repeat 517..560 CDD:276965 30/42 (71%)
Klhl18XP_006244067.1 BTB 28..131 CDD:279045 64/104 (62%)
PHA03098 34..557 CDD:222983 286/524 (55%)
BACK 140..242 CDD:285009 53/101 (52%)
KELCH repeat 282..327 CDD:276965 16/44 (36%)
Kelch 289..341 CDD:128874 24/51 (47%)
Kelch_1 330..375 CDD:279660 25/44 (57%)
KELCH repeat 331..374 CDD:276965 25/42 (60%)
KELCH repeat 378..422 CDD:276965 24/43 (56%)
Kelch 389..435 CDD:128874 25/45 (56%)
KELCH repeat 425..469 CDD:276965 21/43 (49%)
Kelch 436..481 CDD:128874 22/44 (50%)
KELCH repeat 472..516 CDD:276965 21/43 (49%)
Kelch_1 472..515 CDD:279660 20/42 (48%)
Kelch_1 518..562 CDD:279660 30/43 (70%)
KELCH repeat 519..562 CDD:276965 30/42 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352156
Domainoid 1 1.000 118 1.000 Domainoid score I5730
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H14805
Inparanoid 1 1.050 575 1.000 Inparanoid score I1006
OMA 1 1.010 - - QHG59391
OrthoDB 1 1.010 - - D312716at33208
OrthoFinder 1 1.000 - - FOG0000036
OrthoInspector 1 1.000 - - oto95577
orthoMCL 1 0.900 - - OOG6_108344
Panther 1 1.100 - - LDO PTHR24412
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.910

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