DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KLHL18 and Klhl38

DIOPT Version :9

Sequence 1:NP_001262494.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_001020179.1 Gene:Klhl38 / 314996 RGDID:1564169 Length:580 Species:Rattus norvegicus


Alignment Length:568 Identity:164/568 - (28%)
Similarity:249/568 - (43%) Gaps:81/568 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DLSDNSQVEDQYFVYKHDKLFGESFPLFKEIR--RMGK-LCDVTLKVEDQTFSAHRVVLAATIPY 63
            :|.|....:||.|          |..|.:::.  |..| |.||::.........||.|||::.||
  Rat     4 ELPDAVVFKDQNF----------SSDLLRQLNGLRQSKILTDVSICSGACEVPCHRNVLASSSPY 58

  Fly    64 FYAMFTNNMAESRIKEITMKESAIEPSALESLINYVYSGQVRIDNQNVQNLMVGASFLQLSNVRD 128
            |.|||.::..|||..::.:|  .|..:.||.:|.|||:|:|.|...||..||..|:.||...:.:
  Rat    59 FRAMFCSHFRESREAKVQLK--GISSTTLEQVIAYVYTGEVHISAANVLPLMEAAAMLQYPRMFE 121

  Fly   129 ACASFLISRFHPHNVLGIRTFADSMICRQLIDAADKYIDQNFAKVSQSEEFLALDCEQLLELMRR 193
            ||:|:|.|:..|.|.||:...|:.:.|..|...|.:.....|.:|:.|.:...|...:|.:.:..
  Rat   122 ACSSYLQSQLAPSNCLGLVRLAEILSCDSLKKKAREVALTYFPEVAASADLKELCVMELRDYLGD 186

  Fly   194 DELNVRTEEVIFEACMKWVKYAEDKRSELFPQVLAAVRLPLLSPQFLADRVAREELIRSSHQCRD 258
            |:| ...||.:|||.|.|||:....|.....::|..|||..:.|.|....:|.:.|::||..|:.
  Rat   187 DKL-CGEEEKVFEALMAWVKHDLQARWRYMQELLQQVRLQYIHPAFFHHFIASDALLQSSPACQA 250

  Fly   259 LLDEAK--------------------------DFHLM---------PERRGLLQSFRTRQ----- 283
            :|:.||                          ||.|:         ..|..||.|.:|.|     
  Rat   251 ILEMAKKQIFSLYGPSAQDCKLWHTPPRSSYQDFLLLLGGRKDNQQTTRDVLLYSIQTGQWQSLA 315

  Fly   284 --------RSGEFFTGQIYAVGGLA---STGESVSTVEIYDPLTKKWKMGEQMSMMRSRVGVAVL 337
                    .|.......:|.:||:|   ..|....:|.|:.....:|:|||.|...|........
  Rat   316 KLPTRLYKASAVTLHRSVYVLGGMAVREGKGLISCSVYIFSMKLNQWRMGEPMLAARYSHRSTTH 380

  Fly   338 NGKLYAFGGF-NGTERLSTVEVYDPRKNKWSQGCAMLCKRSAVGVAALDDCIYVCGGYDGVTS-L 400
            ...:::.||. .|.|.|.::|.||..::.|.....|........||..|..:|:.||.|.:.: :
  Rat   381 RNFIFSIGGTGEGQELLGSMERYDSIRDVWESMADMPMAVLHPAVAVKDQRLYLFGGEDIMQNPV 445

  Fly   401 NTVEVYYPKSNTW-KTVAQMMKYRSAGGVTQLNGYVYALGGHDGLSIFDSVERYDQAEDVWVKMS 464
            ..::||:...||| |...:|:|...|..|. |...:..:||:.     ..:..||...:.:||.:
  Rat   446 RLIQVYHISRNTWYKMETRMIKNVCAPAVV-LGEKIIIVGGYT-----RRILAYDPQSNKFVKCA 504

  Fly   465 PMLNRRCRLGVATLNGKIYVCGGY-----CGNSFLRSVECYDPQTDTW 507
            .|.:||...|...:..|:||.||.     |......|.:||||:||||
  Rat   505 DMKDRRMHHGATVMGNKLYVTGGRRLTTDCNIEDSASFDCYDPETDTW 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_001262494.1 BTB 29..135 CDD:279045 40/108 (37%)
PHA03098 36..510 CDD:222983 156/532 (29%)
BACK 143..245 CDD:285009 29/101 (29%)
Kelch 292..339 CDD:128874 13/49 (27%)
KELCH repeat 329..372 CDD:276965 10/43 (23%)
Kelch 340..386 CDD:128874 12/46 (26%)
KELCH repeat 376..417 CDD:276965 13/42 (31%)
Kelch 387..433 CDD:128874 15/47 (32%)
KELCH repeat 423..466 CDD:276965 9/42 (21%)
Kelch 435..480 CDD:128874 10/44 (23%)
Kelch_1 469..514 CDD:279660 18/44 (41%)
KELCH repeat 470..514 CDD:276965 17/43 (40%)
Kelch_1 517..560 CDD:279660
KELCH repeat 517..560 CDD:276965
Klhl38NP_001020179.1 BTB 24..128 CDD:279045 40/105 (38%)
PHA03098 48..498 CDD:222983 131/458 (29%)
BACK 136..237 CDD:285009 29/101 (29%)
Kelch_6 280..320 CDD:290672 9/39 (23%)
Kelch 1 284..331 9/46 (20%)
KELCH repeat 324..368 CDD:276965 12/43 (28%)
Kelch 333..382 CDD:128874 13/48 (27%)
Kelch 2 333..382 13/48 (27%)
KELCH repeat 372..416 CDD:276965 10/43 (23%)
Kelch 3 383..430 12/46 (26%)
Kelch 384..427 CDD:128874 11/42 (26%)
KELCH repeat 420..507 CDD:276965 24/92 (26%)
Kelch 4 432..478 15/46 (33%)
Kelch 479..520 CDD:128874 10/45 (22%)
Kelch 5 479..520 10/45 (22%)
Kelch_1 509..559 CDD:279660 18/44 (41%)
KELCH repeat 510..560 CDD:276965 17/43 (40%)
Kelch 6 522..572 14/31 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4441
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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