DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KLHL18 and Klhl5

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_001040558.1 Gene:Klhl5 / 305351 RGDID:1309661 Length:708 Species:Rattus norvegicus


Alignment Length:572 Identity:230/572 - (40%)
Similarity:342/572 - (59%) Gaps:18/572 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DQYF-VYKHDKLFGESFPLFKEIRRMGKLCDVTLKVEDQTFSAHRVVLAATIPYFYAMFTNNMAE 74
            |::| ...|.:   ::|...:...|..:||||.|...|:...|||:||::...||.|||||::.|
  Rat   147 DEFFQALNHAE---QTFKKMENYLRHKQLCDVILVAGDRRIPAHRLVLSSVSDYFAAMFTNDVRE 208

  Fly    75 SRIKEITMKESAIEPSALESLINYVYSGQVRIDNQNVQNLMVGASFLQLSNVRDACASFLISRFH 139
            :|.:||.|:  .:||::|.|||.|.|:|::.:..:|::.|:..|..||||.|.:||..||:.:.|
  Rat   209 ARQEEIKME--GVEPNSLWSLIQYAYTGRLELKEENIECLLSTACLLQLSQVVEACCKFLMKQLH 271

  Fly   140 PHNVLGIRTFADSMICRQLIDAADKYIDQNFAKVSQSEEFLALDCEQLLELMRRDELNVRTEEVI 204
            |.|.||||:|||:..|..|...|..|..::|.:|.:::||:.|...::.:|:..|::|:..||.|
  Rat   272 PSNCLGIRSFADAQGCTDLHKVAHNYTMEHFMEVIRNQEFVLLPANEIAKLLASDDMNIPNEETI 336

  Fly   205 FEACMKWVKYAEDKRSELFPQVLAAVRLPLLSPQFLADRVAREELIRSSHQCRDLLDEAKDFHLM 269
            ..|.:.||::..::|.:...::||.:|||||:|||||| :....|.|...:|:.|:.||..:||:
  Rat   337 LNALLTWVRHDLEQRQKDLSKLLAYIRLPLLAPQFLAD-MENNALFRDDIECQKLIMEAMKYHLL 400

  Fly   270 PERRGLLQSFRTRQRSGEFFTGQIYAVGGLASTGESVSTVEIYDPLTKKWKMGEQMSMMRSRVGV 334
            ||||.:|||.||:.|...  .|.::||||:.|| :..:::|.||..|..|.....|:..|.:.||
  Rat   401 PERRPMLQSPRTKPRKST--VGTLFAVGGMDST-KGATSIEKYDLRTNMWTPVANMNGRRLQFGV 462

  Fly   335 AVLNGKLYAFGGFNGTERLSTVEVYDPRKNKWSQGCAMLCKRSAVGVAALDDCIYVCGGYDGVTS 399
            |||:.|||..||.:|.:.|:|||.|:|:...||....|...|..:|||.|:..:|..||:||.:.
  Rat   463 AVLDDKLYVVGGRDGLKTLNTVECYNPKTKTWSVMPPMSTHRHGLGVAVLEGPMYAVGGHDGWSY 527

  Fly   400 LNTVEVYYPKSNTWKTVAQMMKYRSAGGVTQLNGYVYALGGHDGLSIFDSVERYDQAEDVWVKMS 464
            |||||.:.|::..|..||.|...||..||..|:|.:||:||.||.|...|||.:|...:.|...:
  Rat   528 LNTVERWDPQARQWNFVATMSTPRSTVGVAVLSGKLYAVGGRDGSSCLKSVECFDPHTNKWTLCA 592

  Fly   465 PMLNRRCRLGVATLNGKIYVCGGY-CGNSFLRS-----VECYDPQTDTWKLVTPMNCKRSRVALA 523
            .|..||..:||.|.||.:|..||: ...|.|.|     ||.|||:||.|..|..|:..|..|.:.
  Rat   593 QMSKRRGGVGVTTWNGLLYAIGGHDAPTSNLTSRLSDCVERYDPKTDMWTAVASMSISRDAVGVC 657

  Fly   524 ANMGKLWAIGGYDGESNLSTVEVYDPETDKWTFMPPMCAHSGGVGAGVIRIE 575
            ....||:|:|||||::.|:.||.|||:|::||.:.|:|.  |..||.|:.::
  Rat   658 LLGDKLYAVGGYDGQTYLNIVEAYDPQTNEWTQVAPLCL--GRAGACVVTVK 707

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556 46/116 (40%)
PHA03098 36..510 CDD:222983 198/479 (41%)
KELCH repeat 329..372 CDD:276965 20/42 (48%)
KELCH repeat 376..417 CDD:276965 17/40 (43%)
KELCH repeat 423..466 CDD:276965 18/42 (43%)
KELCH repeat 470..514 CDD:276965 21/49 (43%)
Kelch_1 517..560 CDD:396078 19/42 (45%)
KELCH repeat 517..560 CDD:276965 19/42 (45%)
Klhl5NP_001040558.1 PHA03098 173..695 CDD:222983 219/527 (42%)
KELCH repeat 457..500 CDD:276965 20/42 (48%)
KELCH repeat 504..548 CDD:276965 19/43 (44%)
KELCH repeat 551..594 CDD:276965 18/42 (43%)
KELCH repeat 598..648 CDD:276965 21/49 (43%)
KELCH repeat 651..694 CDD:276965 19/42 (45%)

Return to query results.
Submit another query.