DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and Klhl28

DIOPT Version :9

Sequence 1:NP_001262494.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_001100205.1 Gene:Klhl28 / 299103 RGDID:1311326 Length:571 Species:Rattus norvegicus


Alignment Length:532 Identity:203/532 - (38%)
Similarity:293/532 - (55%) Gaps:15/532 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 IRRMGKLCDVTLKVEDQTFSAHRVVLAATIPYFYAMFTNNMAESRIKEITMKESAIEPSALESLI 96
            :|:..:|||:.|:|.|....||:||||:..|||.||||.|::|....|:..:  .|:.:||::::
  Rat    28 LRQHHELCDIILRVGDVKIHAHKVVLASISPYFKAMFTGNLSEKENSEVEFQ--CIDEAALQAIV 90

  Fly    97 NYVYSGQVRIDNQNVQNLMVGASFLQLSNVRDACASFLISRFHPHNVLGIRTFADSMICRQLIDA 161
            .|.|:|.|.|....|::|:..|:.||:..|...|.:||.|:..|.|.:||..||::..|..|..|
  Rat    91 EYAYTGTVFISQDTVESLLPAANLLQIKLVLKECCTFLESQLDPGNCIGISRFAETYGCHDLYLA 155

  Fly   162 ADKYIDQNFAKVSQSEEFLALDCEQLLELMRRDELNVRTEEVIFEACMKWVKYAEDKRSELFPQV 226
            |.|:|.|||..|.|:|||..|....|.|::..|.|||.|||.:|.|...|:||...:|.:...|:
  Rat   156 ATKFICQNFESVCQTEEFFELTHGDLDEIVSNDCLNVATEETVFYALESWIKYDVQERQKYLAQL 220

  Fly   227 LAAVRLPLLSPQFLADRVAREELIRSSHQCRDLLDEAKDFHLMPERRGLLQS-FRTRQRSGEFFT 290
            |.:|||||||.:||........|||....|:.||:||..:|.|||.|...|: ..||.|..   .
  Rat   221 LNSVRLPLLSVKFLTRLYEANHLIRDDRTCKHLLNEALKYHFMPEHRLSHQTVLMTRPRCA---P 282

  Fly   291 GQIYAVGGLASTGESVSTVEIYDPLTKKWKMGEQMSMMRSRVGVAVLNGKLYAFGGFNGTER--- 352
            ..:.||||.:.....:.:||:|.|....|.....:::.|...|:.||:.|:|..||...:.|   
  Rat   283 KVLCAVGGKSGLFACLDSVEMYFPQNDSWIGLAPLNIPRYEFGICVLDQKVYVIGGIETSVRPGV 347

  Fly   353 -----LSTVEVYDPRKNKWSQGCAMLCKRSAVGVAALDDCIYVCGGYDGVTSLNTVEVYYPKSNT 412
                 .::||.::|..|.|:....|...||.:||..|...:|..|||||.:.|.:||.|.||...
  Rat   348 TVRKHENSVECWNPDTNTWTSLERMNESRSTLGVVVLAGEVYALGGYDGQSYLQSVEKYIPKIRQ 412

  Fly   413 WKTVAQMMKYRSAGGVTQLNGYVYALGGHDGLSIFDSVERYDQAEDVWVKMSPMLNRRCRLGVAT 477
            |:.||.|...||......|:|.:||:||: |.:..:||||||.::|.|..::.|.::|...||..
  Rat   413 WQPVAPMTTTRSCFAAAVLDGMIYAIGGY-GPAHMNSVERYDPSKDSWETVASMADKRIHFGVGV 476

  Fly   478 LNGKIYVCGGYCGNSFLRSVECYDPQTDTWKLVTPMNCKRSRVALAANMGKLWAIGGYDGESNLS 542
            :.|.|:|.||:.|.|.|.|:|.|||..:.|.:..||...|:.|..|.....|:.:||:.|.|.|:
  Rat   477 MLGFIFVVGGHNGVSHLSSIERYDPHQNQWTVCRPMKEPRTGVGAAVIDNYLYVVGGHSGSSYLN 541

  Fly   543 TVEVYDPETDKW 554
            ||:.|||.:|.|
  Rat   542 TVQKYDPISDTW 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_001262494.1 BTB 29..135 CDD:279045 39/102 (38%)
PHA03098 36..510 CDD:222983 184/482 (38%)
BACK 143..245 CDD:285009 45/101 (45%)
Kelch 292..339 CDD:128874 13/46 (28%)
KELCH repeat 329..372 CDD:276965 14/50 (28%)
Kelch 340..386 CDD:128874 16/53 (30%)
KELCH repeat 376..417 CDD:276965 18/40 (45%)
Kelch 387..433 CDD:128874 19/45 (42%)
KELCH repeat 423..466 CDD:276965 17/42 (40%)
Kelch 435..480 CDD:128874 17/44 (39%)
Kelch_1 469..514 CDD:279660 18/44 (41%)
KELCH repeat 470..514 CDD:276965 18/43 (42%)
Kelch_1 517..560 CDD:279660 16/38 (42%)
KELCH repeat 517..560 CDD:276965 16/38 (42%)
Klhl28NP_001100205.1 PHA03098 35..553 CDD:222983 200/523 (38%)
KELCH repeat 321..372 CDD:276965 14/50 (28%)
KELCH repeat 376..419 CDD:276965 20/42 (48%)
KELCH repeat 423..465 CDD:276965 17/42 (40%)
KELCH repeat 469..513 CDD:276965 18/43 (42%)
KELCH repeat 516..559 CDD:276965 16/38 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4441
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59391
OrthoDB 1 1.010 - - D312716at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.830

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