DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and Klhl29

DIOPT Version :9

Sequence 1:NP_001262494.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:XP_038967847.1 Gene:Klhl29 / 298867 RGDID:1311076 Length:951 Species:Rattus norvegicus


Alignment Length:567 Identity:174/567 - (30%)
Similarity:268/567 - (47%) Gaps:92/567 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 GESFPLFKEI---RRMGKLCDVTLKVEDQTFSAHRVVLAATIPYFYAMFTNNMAE----SRIK-E 79
            |....:.||:   ||.....|:.:.||.:.|..|:.|||:...||..:...::.:    ||.| |
  Rat   386 GHPKEMLKELNQQRRAKAFTDLKIVVEGREFEVHQNVLASCSLYFKDLIQRSVQDGSQGSREKLE 450

  Fly    80 ITMKESAIEPSALESLINYVYSGQVRIDNQNVQNLMVGASFLQLSNVRDACASFLISRFHPHNVL 144
            :.:  |.::...||.|:.:||:|.:.||:.|.:.|:..||..|.......|.|||..:....|.|
  Rat   451 LVL--SNLQADVLELLLEFVYTGSLVIDSANAKTLLEAASKFQFHTFCKVCVSFLEKQLTASNCL 513

  Fly   145 GIRTFADSMICRQLIDAADKYIDQNFAKVSQSEEFLALDCEQLLELMRRDELNVRTEEVIFEACM 209
            |:...|::|.|.:|...|..:..|.|.:|:..||.|::..:..:..:..|.||.:.||:::|..:
  Rat   514 GVLAMAEAMQCSELYHMAKAFALQIFPEVAAQEEILSISKDDFIAYVSNDSLNTKAEELVYETVI 578

  Fly   210 KWVKYAEDKRSELFPQVLAAVRLPLLSPQFLADRVAREELIRSSHQCRDLLDEAKDFHLMPERRG 274
            ||:|.....|::...::|||||||.:.|.:|.:.|..||||:||..||||::|||.:|::|..|.
  Rat   579 KWIKKDPATRAQYAAELLAAVRLPFIHPSYLLNVVDNEELIKSSEACRDLVNEAKRYHMLPHARQ 643

  Fly   275 LLQSFRTR-----------------------QRS------------------------GEFFT-- 290
            .:|:.|||                       |||                        .|||:  
  Rat   644 EMQTPRTRPRLSAGVAEVIVLVGGRQMVGMTQRSLVAVTCWNPQNNKWYPLASLPFYDREFFSVV 708

  Fly   291 ---GQIYAVGGLASTGESVSTVEIYDPLTKKWKMGEQMSMMRSRVGVAVLNGKLYAFGGFNGTER 352
               ..||..||:.| |.:::.|..|..|...|.:..:|::.|.|....|.:||:|..||......
  Rat   709 SAGDNIYLSGGMES-GVTLADVWCYMSLLDNWNLVSRMTVPRCRHNSLVYDGKIYTLGGLGVAGN 772

  Fly   353 LSTVEVYDPRKNKWSQGCAMLCKRSAVGVAALDDC---IYVCGGY-DGVTSLNTVEVYYPKSNTW 413
            :..||.||...|:| :..|.|.|  ||..||...|   |||.||. :...:...::.|.|::|||
  Rat   773 VDHVERYDTITNQW-EAVAPLPK--AVHSAAATVCGGKIYVFGGVNEAGRAAGVLQSYVPQTNTW 834

  Fly   414 KTV-AQMMKYRSAGGVTQLNGYVYALGGHDGLSIFDSVERYDQAEDVW------VKMSPMLNR-R 470
            ..: :.|:..:.|..|| |||:|:.|||           .|.:|..::      :|..|.:|. |
  Rat   835 SFIESPMIDNKYAPAVT-LNGFVFILGG-----------AYARATTIYDPEKGNIKAGPNMNHSR 887

  Fly   471 CRLGVATLNGKIYVCGGYCGNS--FLRSVECYDPQTDTWKLVTPMNC 515
            .......|:||||..||...:.  .|.::|.|:|.|:||.|:..|.|
  Rat   888 QFCSAVVLDGKIYATGGIVSSEGPALGNMEAYEPTTNTWTLLPHMPC 934

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_001262494.1 BTB 29..135 CDD:279045 35/113 (31%)
PHA03098 36..510 CDD:222983 166/544 (31%)
BACK 143..245 CDD:285009 32/101 (32%)
Kelch 292..339 CDD:128874 14/46 (30%)
KELCH repeat 329..372 CDD:276965 14/42 (33%)
Kelch 340..386 CDD:128874 17/45 (38%)
KELCH repeat 376..417 CDD:276965 15/45 (33%)
Kelch 387..433 CDD:128874 16/50 (32%)
KELCH repeat 423..466 CDD:276965 13/48 (27%)
Kelch 435..480 CDD:128874 11/51 (22%)
Kelch_1 469..514 CDD:279660 16/47 (34%)
KELCH repeat 470..514 CDD:276965 16/45 (36%)
Kelch_1 517..560 CDD:279660
KELCH repeat 517..560 CDD:276965
Klhl29XP_038967847.1 PHA03247 <98..366 CDD:223021
BTB_POZ 388..514 CDD:365784 37/127 (29%)
PHA03098 409..936 CDD:222983 168/544 (31%)
BACK_KLHL29_KBTBD9 508..609 CDD:350543 32/100 (32%)
KELCH repeat 653..697 CDD:276965 3/43 (7%)
KELCH repeat 702..745 CDD:276965 13/43 (30%)
KELCH repeat 749..792 CDD:276965 15/43 (35%)
KELCH repeat 796..884 CDD:276965 29/99 (29%)
KELCH repeat 887..933 CDD:276965 16/45 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4441
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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