DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and AT4G19330

DIOPT Version :9

Sequence 1:NP_001262494.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_001319995.1 Gene:AT4G19330 / 28720147 AraportID:AT4G19330 Length:383 Species:Arabidopsis thaliana


Alignment Length:201 Identity:50/201 - (24%)
Similarity:77/201 - (38%) Gaps:31/201 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   292 QIYAVGGLASTGESVSTVEIYDPLTKKWKMGEQMSMMRSRVGVAVLNGKLYAFGGFNGTERLSTV 356
            :.|.:||...|..  :.|.:||.|..|.:....|.:.|......||:||||..||....|.....
plant   147 ETYEIGGQNMTPS--TDVWVYDKLIGKQRKAPSMMVARKNAFTCVLDGKLYVMGGCEADESTHWA 209

  Fly   357 EVYDPRKNKW--------------------SQGCAMLCKRSAVGVAALDDCIY-VCGGYDGVTSL 400
            ||:||:...|                    .||...:.......|..:.:|:: |.....|.::.
plant   210 EVFDPKTQTWEALPDPGVELRYSSVKNIQTKQGKVYVRSNKKNFVYLIKECMWEVAEENLGESTC 274

  Fly   401 NTVEVYYPKSNT--WKTVAQMMKYRSAGGVTQLNGYVYA---LGGHDG-LSIF--DSVERYDQAE 457
            ....|.|..||.  |...|:..::|...||:.|..|...   :|.:.| |.:|  .:|.|....:
plant   275 EIENVCYCYSNKRYWWYDAKCEEWRLVKGVSGLYEYYKTDSEIGNYGGKLVVFWDRAVSRLTATK 339

  Fly   458 DVWVKM 463
            ::|..|
plant   340 EIWCAM 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_001262494.1 BTB 29..135 CDD:279045
PHA03098 36..510 CDD:222983 50/201 (25%)
BACK 143..245 CDD:285009
Kelch 292..339 CDD:128874 13/46 (28%)
KELCH repeat 329..372 CDD:276965 17/62 (27%)
Kelch 340..386 CDD:128874 14/65 (22%)
KELCH repeat 376..417 CDD:276965 9/43 (21%)
Kelch 387..433 CDD:128874 13/48 (27%)
KELCH repeat 423..466 CDD:276965 13/47 (28%)
Kelch 435..480 CDD:128874 8/35 (23%)
Kelch_1 469..514 CDD:279660
KELCH repeat 470..514 CDD:276965
Kelch_1 517..560 CDD:279660
KELCH repeat 517..560 CDD:276965
AT4G19330NP_001319995.1 F-box 34..76 CDD:306992
BTB <122..241 CDD:333434 25/95 (26%)
NanM 180..>326 CDD:330881 35/145 (24%)
Kelch_1 181..226 CDD:279660 15/44 (34%)
KELCH repeat 182..224 CDD:276965 15/41 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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