DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KLHL18 and C53A5.11

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_506607.2 Gene:C53A5.11 / 183741 WormBaseID:WBGene00008269 Length:382 Species:Caenorhabditis elegans


Alignment Length:37 Identity:10/37 - (27%)
Similarity:20/37 - (54%) Gaps:5/37 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRESQSSVVIIRRYEAKKD---YDEEDEELVYWYYEN 34
            ||..:::.::|.::  ||:   .|..::.||....||
 Worm     7 MRLREANRLMIAKF--KKESPANDSPEQRLVRLTNEN 41

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556 5/15 (33%)
PHA03098 36..510 CDD:222983
KELCH repeat 329..372 CDD:276965
KELCH repeat 376..417 CDD:276965
KELCH repeat 423..466 CDD:276965
KELCH repeat 470..514 CDD:276965
Kelch_1 517..560 CDD:396078
KELCH repeat 517..560 CDD:276965
C53A5.11NP_506607.2 NanM 136..360 CDD:442289
KELCH repeat 153..197 CDD:276965
KELCH repeat 200..243 CDD:276965
KELCH repeat 247..290 CDD:276965
KELCH repeat 293..339 CDD:276965
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.