DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KLHL18 and C53A5.9

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_506605.2 Gene:C53A5.9 / 183739 WormBaseID:WBGene00008267 Length:445 Species:Caenorhabditis elegans


Alignment Length:560 Identity:126/560 - (22%)
Similarity:204/560 - (36%) Gaps:170/560 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 HDKLFGESFPLFKEIRRMGK-------LCDVTLKVEDQTFSAHRVVLAATIPYFYAMFTNNMAES 75
            |.|...:|.....|::....       :||..|:.:|                  |.|:.:..|:
 Worm    12 HTKNASQSVTALDELKTPSSEVADAWDVCDQPLEYQD------------------AQFSESEMET 58

  Fly    76 RIKEITMKESAIEPSALESLINYVYSGQVRIDNQNVQNLMVGASFLQLSNVRDACASFLISRFHP 140
            ::||  :::.:||.|              |:..:|:|........|||:           ...:|
 Worm    59 QMKE--LEDCSIEAS--------------RVFLENLQKSFKLMKLLQLT-----------QSLNP 96

  Fly   141 HNVLGIRTFADSMICRQLIDAADKYIDQNFAKVSQSEEFLALDCEQLLELMRRDELNVRTEEVIF 205
            .         :|...|::|....|.|:..   |||                              
 Worm    97 Q---------ESSYNRKIISTEMKKINDT---VSQ------------------------------ 119

  Fly   206 EACMKWVKYAEDKRSELFPQVLAAVRL----------PLLSPQFLADRVAREELIRSSHQCRDLL 260
                  :||| .||.|:..:.|...|.          |.:.|..:||:.      :|:|  :.||
 Worm   120 ------LKYA-GKRIEMINEHLEKHRFTGKDGDAFLEPNMDPVLIADQA------QSAH--KPLL 169

  Fly   261 DEAKDFHLMPERRGLLQSFRTRQRSGEFFTGQIYAVGGLASTGESVSTVEIYDPLTKKWKMGEQM 325
                                               :|.             :||.|:|:|...::
 Worm   170 -----------------------------------IGS-------------FDPKTQKYKPIGRL 186

  Fly   326 SMMRSRVGVAVLNGKLYAFGGFNGTERLSTVEVYDPRKNKWSQGCAMLCKRSAVGVAALDDCIYV 390
            ...|:...||.....||..||.:..:.|:..|.|:.:||....|..:..||:.......:..:||
 Worm   187 PDPRANFAVASSKTNLYVIGGTHNGQFLNKFEYYNQKKNARCMGANLNHKRTKPAAGFHNGALYV 251

  Fly   391 CGGYDGVTSLNTVEVYYPKSNTWKTVAQMMKYRSAGGVTQLNGYVYALGGHDGLSIFDSVERYDQ 455
            .||||.: .|::||:|..:..|||....:...|:...|....|.::.|||.:|.|..:|:|:...
 Worm   252 VGGYDSI-YLSSVELYDLEEGTWKNGPSLNNCRANAAVVACYGEIFVLGGFNGKSNEESIEKISA 315

  Fly   456 AEDVWVKMSPMLNRRCRLGVATLNGKIYVCGGYCG-NSFLRSVECYDPQTDTWKLVTPMNCKRSR 519
            :.:.:.....|...|...|.....|:||:.||:.. .:.|:||..|||.|.||:....|...|..
 Worm   316 SGNEFEIFGEMEGGRSGFGACVFQGRIYIAGGWSNTRNTLKSVRSYDPYTKTWRDEPSMKNARKA 380

  Fly   520 VALAANMGKLWAIGGYDGESN-LSTVEVYDPETDKWTFMP 558
            ..|.|....::||.|||.||. |..:|.:||:..||:.:|
 Worm   381 FTLHATNEAIYAIRGYDEESALLDQIERFDPKKLKWSIVP 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556 21/123 (17%)
PHA03098 36..510 CDD:222983 104/491 (21%)
KELCH repeat 329..372 CDD:276965 13/42 (31%)
KELCH repeat 376..417 CDD:276965 14/40 (35%)
KELCH repeat 423..466 CDD:276965 10/42 (24%)
KELCH repeat 470..514 CDD:276965 16/44 (36%)
Kelch_1 517..560 CDD:396078 17/43 (40%)
KELCH repeat 517..560 CDD:276965 17/43 (40%)
C53A5.9NP_506605.2 NanM 181..424 CDD:442289 74/241 (31%)
KELCH repeat 190..234 CDD:276965 13/43 (30%)
KELCH repeat 237..279 CDD:276965 14/42 (33%)
KELCH repeat 283..327 CDD:276965 10/43 (23%)
KELCH repeat 330..375 CDD:276965 16/44 (36%)
KELCH repeat 378..421 CDD:276965 17/43 (40%)

Return to query results.
Submit another query.