DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KLHL18 and bath-44

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_495549.1 Gene:bath-44 / 174210 WormBaseID:WBGene00015567 Length:397 Species:Caenorhabditis elegans


Alignment Length:164 Identity:44/164 - (26%)
Similarity:73/164 - (44%) Gaps:24/164 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 KEIRRMGKLCDVTLKVEDQTFSAHRVVLAATIPYFYAMFTNNMAESRIKEITMKESAIEPSALES 94
            :.:.|.||..|.||.||::...||:.:|||..|.|.||...:.||::.....:::  |:...:::
 Worm   201 ENLYRSGKHADFTLVVEERELKAHKAILAARSPVFAAMMEPHTAEAQNSRAILRD--IDYEVVQA 263

  Fly    95 LINYVYSGQVRIDNQNVQNLMVGASFLQLSNVRDACASFLISRFHPHNVLGIRTFADSMICRQLI 159
            ::.|:|:|.......|..:::..|....|..:::      |:.....|.|...|     :|:.|.
 Worm   264 ILYYIYTGTCTNMGGNALDILAAAERFALPGLKN------IAEVAMRNGLATET-----VCKNLA 317

  Fly   160 DA-----------ADKYIDQNFAKVSQSEEFLAL 182
            .|           |.|||..|...|..||.||.|
 Worm   318 FAEMYGLVDFKKEAIKYICMNANAVINSEGFLRL 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556 27/106 (25%)
PHA03098 36..510 CDD:222983 43/158 (27%)
KELCH repeat 329..372 CDD:276965
KELCH repeat 376..417 CDD:276965
KELCH repeat 423..466 CDD:276965
KELCH repeat 470..514 CDD:276965
Kelch_1 517..560 CDD:396078
KELCH repeat 517..560 CDD:276965
bath-44NP_495549.1 MATH 26..174 CDD:238068
BTB 200..307 CDD:395526 28/113 (25%)
BACK 310..362 CDD:350515 15/47 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.