DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and bath-47

DIOPT Version :9

Sequence 1:NP_001262494.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_494006.2 Gene:bath-47 / 173532 WormBaseID:WBGene00006464 Length:706 Species:Caenorhabditis elegans


Alignment Length:270 Identity:60/270 - (22%)
Similarity:97/270 - (35%) Gaps:62/270 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 RRMGKLCDVTLKVEDQTFSAHRVVLAATIPYFYAMFTNNMAESRIKEITMKESAIEPSALESLIN 97
            :.|.|..||.|.|:.:.|...|.:|:....||.::|   ..:|..:|..:  |.:||...:..:.
 Worm    10 KSMEKYTDVVLVVKQERFYVSRAILSEHCTYFQSLF---CGDSNYQEHII--SDVEPQDFQKFLE 69

  Fly    98 YVYSGQVRIDNQNVQNLMVGASFLQLSNVRDACASFLIS-------------------RFHPHNV 143
            .|: |:..|....||.::..|.......|...|..|||:                   ....|..
 Worm    70 VVH-GEPAIFEATVQKILPLAQKFGSKTVLQKCERFLITISTVRLSTKWNLAKQYGLDELQAHCK 133

  Fly   144 LGIRTFADSMICR-------QLIDAADKYI-DQNFAKVSQSEEFLALDCEQLLELMRRDELNVRT 200
            |..:|   :.|.|       :.:..:||:| |.:|.||    :.||             |.::|.
 Worm   134 LEFKT---AQIVRKNPQPEPKSLAYSDKFIFDHSFEKV----DGLA-------------EGDMRR 178

  Fly   201 EEVIFEACMKWVKYAEDKRSELFPQVLAAVRLPLLSPQFLADRVAREE--LIRSSHQCRDLLDEA 263
            .:.|......|..|...|...|      .|.|........:|...|.:  :..::....||:.:.
 Worm   179 SQPITHLDFTWTIYITRKNQHL------RVSLCCGKAHLTSDWTVRADFKMTLTAKGSPDLVSDT 237

  Fly   264 KD-FHLMPER 272
            |. |||..|:
 Worm   238 KGFFHLDSEK 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_001262494.1 BTB 29..135 CDD:279045 26/101 (26%)
PHA03098 36..510 CDD:222983 59/267 (22%)
BACK 143..245 CDD:285009 23/109 (21%)
Kelch 292..339 CDD:128874
KELCH repeat 329..372 CDD:276965
Kelch 340..386 CDD:128874
KELCH repeat 376..417 CDD:276965
Kelch 387..433 CDD:128874
KELCH repeat 423..466 CDD:276965
Kelch 435..480 CDD:128874
Kelch_1 469..514 CDD:279660
KELCH repeat 470..514 CDD:276965
Kelch_1 517..560 CDD:279660
KELCH repeat 517..560 CDD:276965
bath-47NP_494006.2 BTB 8..106 CDD:279045 26/101 (26%)
BTB 17..109 CDD:197585 26/97 (27%)
MATH 171..280 CDD:295307 20/96 (21%)
MATH 455..552 CDD:295307
BTB 563..670 CDD:279045
BTB 577..673 CDD:197585
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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