DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and LOC116406879

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:XP_031747738.1 Gene:LOC116406879 / 116406879 XenbaseID:XB-GENE-29092323 Length:614 Species:Xenopus tropicalis


Alignment Length:28 Identity:8/28 - (28%)
Similarity:13/28 - (46%) Gaps:0/28 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RESQSSVVIIRRYEAKKDYDEEDEELVY 29
            |.|:|.:.:....:.||....||.:..|
 Frog    10 RLSKSEMSLYAVLDLKKGASPEDFKKSY 37

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556 3/10 (30%)
PHA03098 36..510 CDD:222983
KELCH repeat 329..372 CDD:276965
KELCH repeat 376..417 CDD:276965
KELCH repeat 423..466 CDD:276965
KELCH repeat 470..514 CDD:276965
Kelch_1 517..560 CDD:396078
KELCH repeat 517..560 CDD:276965
LOC116406879XP_031747738.1 PHA03098 29..556 CDD:222983 3/9 (33%)
NanM 299..565 CDD:442289
KELCH repeat 312..359 CDD:276965
KELCH repeat 363..408 CDD:276965
KELCH repeat 411..454 CDD:276965
KELCH repeat 458..507 CDD:276965
KELCH repeat 510..556 CDD:276965
Blue background indicates that the domain is not in the aligned region.

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