DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KLHL18 and LOC100496285

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:XP_031755220.1 Gene:LOC100496285 / 100496285 XenbaseID:XB-GENE-29083111 Length:642 Species:Xenopus tropicalis


Alignment Length:547 Identity:147/547 - (26%)
Similarity:245/547 - (44%) Gaps:99/547 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDLSDNSQVEDQYFVYKHDKLFGESFPLFKEIRRMGKLCDVTLKVEDQTFSAHRVVLAATIPYFY 65
            :...|:..||.:......|....|            :|||.|:..|.:.|..||||||:..|||.
 Frog    17 LSCGDHESVESRVIKGLRDLYLTE------------ELCDTTVVTESRRFLCHRVVLASVSPYFR 69

  Fly    66 AMFTNNMAESRIKEITMKESAIEPSALESLINYVYSGQVRIDNQNVQNLMVGASFLQLSNVRDAC 130
            |||:::|.|:...|:.:.:  |.||.:::::|::|:|:..|:...||.|...:|.||:|.::..|
 Frog    70 AMFSSSMREAERGEVVLPD--IPPSIMQTVLNFIYTGEATINMDTVQELFTVSSRLQISPLQHLC 132

  Fly   131 ASFLISRFHPHNVLGIRTFADSMICRQLIDAADKYIDQNFAKVSQSEEFLALDCEQLLELMRRDE 195
            :|:|....:..:...|...|....||.|::||.:||..:|..:::.::||.||.|:|..::..|:
 Frog   133 SSYLNKELNNDSCFWIYRLAHIHNCRSLLEAAIQYISCHFISLTKEQDFLQLDLEELSPILSSDK 197

  Fly   196 LNVRTEEVIFEACMKWVKYAEDKRSELFPQVLAAVRLPLLSPQFLADRVARE---ELIRSSHQ-- 255
            |.|.:|..::...::|.::.....:.:..::...:|..|:|||.| :.|..|   ||..|.||  
 Frog   198 LMVSSELDVYHLALRWWQFNCCSYTSIPEKLTKTIRFHLMSPQEL-EEVEEEFHKELCSSQHQFS 261

  Fly   256 -------------CRDLLDEAKDFHLMPERRGLLQSFRTRQRSGEFFTGQIYAVGGLASTGESVS 307
                         |.|::|...:   :|:...||:|                             
 Frog   262 LQLRQGMFEDRIICMDVMDREDN---LPKEDYLLES----------------------------- 294

  Fly   308 TVEIYDPLTKKW-KMGEQMSMMRSRVGVAVLNGK-LYAFGGFNGTERLS-TVEVYDPRKNKWSQG 369
                |||:::.| |:.....:..||.   :..|: ||..||.|..|.|: |:.|:|...|:|||.
 Frog   295 ----YDPVSEVWGKLPFPKYLTDSRF---LAEGRYLYISGGRNEDETLTDTLYVFDSVMNEWSQL 352

  Fly   370 CAMLCKRSAVGVAALDDCIYVCGGYDGVTSLNTVEVYYPKSNTWKTVAQMMKYRSAGGVTQLNGY 434
            .:|...|...|..|....:|..||:||...:::.|.|......||.::.:.......|..||.|.
 Frog   353 PSMSIPRVNHGFVAYAQRLYALGGWDGREIIDSAEYYSVPEKCWKGLSNLPLRIQNFGCAQLKGK 417

  Fly   435 VYALGG----------HDGLSIFDSVERYDQAEDVWVKMSPMLNRRCRLGVATLNGKIYVCGGYC 489
            :|.|||          |.|..:      ||.|.:.|... |:..:....|..||..|:.|.|||.
 Frog   418 LYLLGGTTVTSKSTLNHLGFLM------YDIASETWSHF-PLKMQLSSAGAVTLGDKLLVIGGYV 475

  Fly   490 GNSFLRSVECYDPQTDTWKLVTPMNCK 516
             :|:....|.::|:      .|..:|:
 Frog   476 -SSYWDYYEPFEPR------ATDQHCE 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556 39/116 (34%)
PHA03098 36..510 CDD:222983 140/504 (28%)
KELCH repeat 329..372 CDD:276965 17/44 (39%)
KELCH repeat 376..417 CDD:276965 12/40 (30%)
KELCH repeat 423..466 CDD:276965 14/52 (27%)
KELCH repeat 470..514 CDD:276965 12/43 (28%)
Kelch_1 517..560 CDD:396078 147/547 (27%)
KELCH repeat 517..560 CDD:276965 147/547 (27%)
LOC100496285XP_031755220.1 PHA03098 57..486 CDD:222983 133/478 (28%)
KELCH repeat 359..403 CDD:276965 12/43 (28%)
KELCH repeat 406..451 CDD:276965 14/51 (27%)
KELCH repeat 545..586 CDD:276965
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.