DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KLHL18 and klhl2

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:XP_002934798.2 Gene:klhl2 / 100495582 XenbaseID:XB-GENE-494633 Length:608 Species:Xenopus tropicalis


Alignment Length:578 Identity:234/578 - (40%)
Similarity:344/578 - (59%) Gaps:12/578 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DLSDNSQVEDQYFVY-KHDKLFGESFPLFKEIRRMGKLCDVTLKVEDQTFSAHRVVLAATIPYFY 65
            |:.||.:......|. :|.:   ::|.:..|:|....|||||:..||...:||:||||:..|||:
 Frog    36 DVKDNGEKFCPITVNPRHTR---KAFKVMNELRSQNLLCDVTIVAEDVEIAAHKVVLASCSPYFH 97

  Fly    66 AMFTNNMAESRIKEITMKESAIEPSALESLINYVYSGQVRIDNQNVQNLMVGASFLQLSNVRDAC 130
            ||||..|:|||.|.:.:||  ::...|:.|::|||:.::::..:|||.|:..|..|||.:|:..|
 Frog    98 AMFTGEMSESRAKRVRIKE--VDGWTLKMLVDYVYTAEIKVTEENVQVLLPAAGLLQLQDVKKTC 160

  Fly   131 ASFLISRFHPHNVLGIRTFADSMICRQLIDAADKYIDQNFAKVSQSEEFLALDCEQLLELMRRDE 195
            ..||.|:.||.|.||||.|||...|..|::.|:.|.:|:|:.:...||||.|..||:..|:..|:
 Frog   161 CEFLESQLHPSNCLGIRAFADMHACTDLLNQANGYAEQHFSDIVTGEEFLNLGIEQVCSLIASDK 225

  Fly   196 LNVRTEEVIFEACMKWVKYAEDKRSELFPQVLAAVRLPLLSPQFLADRVAREELIRSSHQCRDLL 260
            |.|.:||.:|||.:.||.:..:.|.|....::..|||||||..:|..||..|.|:::|..|:|.|
 Frog   226 LTVVSEEKVFEAVIVWVNHDTEVRQEHMSHLMEHVRLPLLSRDYLVQRVEEETLVKNSSACKDYL 290

  Fly   261 DEAKDFHLMP-ERRGLLQSFRTRQRSGEFFTGQIYAVGGLASTGESVSTVEIYDPLTKKWKMGEQ 324
            .||..:||:| ::|.|::|.|||||:.......:..|||.|.  :::.:||.||...::|....:
 Frog   291 IEAMKYHLLPGDQRTLIKSARTRQRTPVSMPKLMVVVGGQAP--KAIRSVECYDFKEEQWHQLAE 353

  Fly   325 MSMMRSRVGVAVLNGKLYAFGGFNGTERLSTVEVYDPRKNKWSQGCAMLCKRSAVGVAALDDCIY 389
            :...|.|.||..::|.::|.|||||:.|:.||:.|||.|::|:....|..:||.:|.|.|:..:|
 Frog   354 LPSRRCRSGVVYMSGHVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMQDRRSTLGAAVLNGLLY 418

  Fly   390 VCGGYDGVTSLNTVEVYYPKSNTWKTVAQMMKYRSAGGVTQLNGYVYALGGHDGLS--IFDSVER 452
            ..||:||.|.|.|||.|..|:|.|..||.|...||:.||..:.|.:||:||:||.|  ...:||.
 Frog   419 AVGGFDGSTGLATVEAYNIKANEWFHVAPMNTRRSSVGVGVVGGMLYAVGGYDGASRQCLSTVEC 483

  Fly   453 YDQAEDVWVKMSPMLNRRCRLGVATLNGKIYVCGGYCGNSFLRSVECYDPQTDTWKLVTPMNCKR 517
            |:.:.:.|..::.|..||...||..|||.:|..||:.|....:|||.:||.|:|||.|..||..|
 Frog   484 YNPSTNEWSYITEMGTRRSGAGVGVLNGLLYAVGGHDGPLVRKSVEVFDPSTNTWKQVADMNMCR 548

  Fly   518 SRVALAANMGKLWAIGGYDGESNLSTVEVYDPETDKWTFMPPMCAHSGGVGAGVIRIE 575
            ....:.|..|.|:.:||.||..||::||.|:..|||||.: |.|..:|...|||..|:
 Frog   549 RNAGVCAVEGMLYVVGGDDGSCNLASVEYYNSTTDKWTLL-PSCMSTGRSYAGVTVID 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556 47/116 (41%)
PHA03098 36..510 CDD:222983 198/476 (42%)
KELCH repeat 329..372 CDD:276965 19/42 (45%)
KELCH repeat 376..417 CDD:276965 19/40 (48%)
KELCH repeat 423..466 CDD:276965 16/44 (36%)
KELCH repeat 470..514 CDD:276965 20/43 (47%)
Kelch_1 517..560 CDD:396078 18/42 (43%)
KELCH repeat 517..560 CDD:276965 18/42 (43%)
klhl2XP_002934798.2 BTB_POZ_KLHL2_Mayven 50..170 CDD:349647 49/124 (40%)
PHA03098 71..587 CDD:222983 217/519 (42%)
BACK_KLHL2_Mayven 168..297 CDD:350587 54/128 (42%)
KELCH repeat 318..354 CDD:276965 9/37 (24%)
KELCH repeat 358..401 CDD:276965 19/42 (45%)
KELCH repeat 501..545 CDD:276965 20/43 (47%)
KELCH repeat 548..590 CDD:276965 18/42 (43%)

Return to query results.
Submit another query.