DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and klhl28

DIOPT Version :9

Sequence 1:NP_001262494.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:XP_017952205.1 Gene:klhl28 / 100493680 XenbaseID:XB-GENE-994648 Length:573 Species:Xenopus tropicalis


Alignment Length:534 Identity:203/534 - (38%)
Similarity:299/534 - (55%) Gaps:19/534 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 IRRMGKLCDVTLKVEDQTFSAHRVVLAATIPYFYAMFTNNMAESRIKEITMKESAIEPSALESLI 96
            :|:..:|||:.|:|.|....||:||||:..|||.||||.|::|....::..:  :::.:||:::|
 Frog    30 LRQHHELCDIVLQVGDVKIHAHKVVLASISPYFKAMFTGNLSEKENSQVEFQ--SVDEAALQAII 92

  Fly    97 NYVYSGQVRIDNQNVQNLMVGASFLQLSNVRDACASFLISRFHPHNVLGIRTFADSMICRQLIDA 161
            .|.|:|.|.|..:.|::|:..|:.||:..|...|.:||.|:....|.:||..||::..|.:|..|
 Frog    93 EYAYTGTVFISQETVESLLPAANLLQIKLVLKECCAFLESQLDVGNCIGISRFAETYGCHELYLA 157

  Fly   162 ADKYIDQNFAKVSQSEEFLALDCEQLLELMRRDELNVRTEEVIFEACMKWVKYAEDKRSELFPQV 226
            |:|||.|||..|.|:|||..|...:|.|::..|.|||..||.:|.|...|:||...:|.:...|:
 Frog   158 ANKYICQNFEDVCQTEEFFELSNSELHEIVSNDCLNVVNEETVFYALESWIKYDVQERQKYLAQL 222

  Fly   227 LAAVRLPLLSPQFLADRVAREELIRSSHQCRDLLDEAKDFHLMPERRGLLQS-FRTRQRSGEFFT 290
            |..|||||||.:||........|||..|.|:.||:||..:|.|||.|...|: .:|:.|..   .
 Frog   223 LHCVRLPLLSVKFLTRLYEANHLIRDDHTCKHLLNEALKYHFMPEHRLSHQTVLKTQPRCA---P 284

  Fly   291 GQIYAVGGLASTGESVSTVEIYDPLTKKWKMGEQMSMMRSRVGVAVLNGKLYAFG--------GF 347
            ..:.||||.|.....:.::|:|.|....|.....:...|...|:..|:.|:|..|        |.
 Frog   285 KVLCAVGGKAGLFACLESMEMYFPQDDSWIGLAPLGSPRYEFGLCTLDQKVYVVGGIATHMRQGI 349

  Fly   348 NGTERLSTVEVYDPRKNKWSQGCAMLCKRSAVGVAALDDCIYVCGGYDGVTSLNTVEVYYPKSNT 412
            |..:..::||.:||..|||:....|:..||.:|...|...:|..|||||.:.|.:||.|.||:..
 Frog   350 NYRKHENSVECWDPVTNKWTSIERMIECRSTLGAVVLAGEMYALGGYDGQSCLQSVEKYIPKAKE 414

  Fly   413 WKTVAQMMKYRS--AGGVTQLNGYVYALGGHDGLSIFDSVERYDQAEDVWVKMSPMLNRRCRLGV 475
            |..||.|:|.||  ||.|  |:|.:||:||: |.:..:||||||.:.|.|..::.|.::|...||
 Frog   415 WHPVAPMIKTRSCFAGAV--LDGMIYAIGGY-GPAHMNSVERYDPSRDSWEMVASMEDKRINFGV 476

  Fly   476 ATLNGKIYVCGGYCGNSFLRSVECYDPQTDTWKLVTPMNCKRSRVALAANMGKLWAIGGYDGESN 540
            :.:.|.|:|.||:.|.:.|.|:|.|||..:.|.:..||...|:.|..|.....|:.:||:.|.|.
 Frog   477 SVMLGFIFVVGGHNGVAHLSSIERYDPHQNQWTVCRPMKEPRTGVGAAVVDNYLYVVGGHSGSSY 541

  Fly   541 LSTVEVYDPETDKW 554
            |:.|:.|||.:|.|
 Frog   542 LNYVQKYDPISDTW 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_001262494.1 BTB 29..135 CDD:279045 38/102 (37%)
PHA03098 36..510 CDD:222983 185/484 (38%)
BACK 143..245 CDD:285009 45/101 (45%)
Kelch 292..339 CDD:128874 12/46 (26%)
KELCH repeat 329..372 CDD:276965 15/50 (30%)
Kelch 340..386 CDD:128874 17/53 (32%)
KELCH repeat 376..417 CDD:276965 17/40 (43%)
Kelch 387..433 CDD:128874 23/47 (49%)
KELCH repeat 423..466 CDD:276965 20/44 (45%)
Kelch 435..480 CDD:128874 17/44 (39%)
Kelch_1 469..514 CDD:279660 17/44 (39%)
KELCH repeat 470..514 CDD:276965 17/43 (40%)
Kelch_1 517..560 CDD:279660 15/38 (39%)
KELCH repeat 517..560 CDD:276965 15/38 (39%)
klhl28XP_017952205.1 PHA03098 37..555 CDD:222983 200/525 (38%)
KELCH repeat 323..374 CDD:276965 15/50 (30%)
KELCH repeat 378..421 CDD:276965 19/42 (45%)
KELCH repeat 425..467 CDD:276965 20/44 (45%)
KELCH repeat 471..515 CDD:276965 17/43 (40%)
KELCH repeat 518..561 CDD:276965 15/38 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59391
OrthoDB 1 1.010 - - D312716at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.930

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