DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and LOC100334314

DIOPT Version :9

Sequence 1:NP_001262494.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:XP_009291058.1 Gene:LOC100334314 / 100334314 -ID:- Length:855 Species:Danio rerio


Alignment Length:558 Identity:175/558 - (31%)
Similarity:258/558 - (46%) Gaps:86/558 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LFKEI---RRMGKLCDVTLKVEDQTFSAHRVVLAATIPYFYAMFTNNMAESRIKE-ITMKESAIE 88
            :.||:   ||..:..|:.:.||.:.|..|:.|||:...||..|.....||:|..| :.:..|.|.
Zfish   297 MLKELNQQRREKEFTDLKIIVEGKEFEVHQNVLASCSLYFKDMVKRLSAENRSGEKMQLSMSNIS 361

  Fly    89 PSALESLINYVYSGQVRIDNQNVQNLMVGASFLQLSNVRDACASFLISRFHPHNVLGIRTFADSM 153
            ...||.|:.:||:|.:.||:.|.:.|:..|:..|.|.....|.|||..:....|.||:...|::|
Zfish   362 SDVLELLLEFVYTGSLIIDSVNAKTLLEAANKFQFSTFCKVCISFLEKQLTAANCLGVLAMAEAM 426

  Fly   154 ICRQLIDAADKYIDQNFAKVSQSEEFLALDCEQLLELMRRDELNVRTEEVIFEACMKWVKYAEDK 218
            .|.:|.:.|..:..|||..|:..||.|.:..|.|:..|..|.||.:.||:::|..:||:|.....
Zfish   427 QCTELHNMAKAFALQNFPDVAGQEEILNVSKEDLVSYMSNDSLNTKAEELVYETVIKWIKKEPSS 491

  Fly   219 RSELFPQVLAAVRLPLLSPQFLADRVAREELIRSSHQCRDLLDEAKDFHLMPERRGLLQSFRTRQ 283
            |.:...::||.||||.:.|.:|.:.|..||||:||..||||::|||.:|::|..|..:|:.|||.
Zfish   492 RVQHVSELLAVVRLPFIHPSYLLNVVDNEELIKSSEACRDLVNEAKRYHMLPHARQEMQTPRTRP 556

  Fly   284 R-----------------------------------------------SGEFFT-----GQIYAV 296
            |                                               :.|||:     ..||..
Zfish   557 RLSAGVAEVIVLVGGRQVVGMNHRSLTAVTCFNPQNNKWYPLASLPFYNREFFSVVSAGDNIYLS 621

  Fly   297 GGLASTGESVSTVEIYDPLTKKWKMGEQMSMMRSRVGVAVLNGKLYAFGGFNGTERLSTVEVYDP 361
            ||:.| |.:::.|..|..|...|.:..:|::.|.|....|.:|||||.||......|..||.||.
Zfish   622 GGVES-GVTLADVWCYMSLLDNWNLVSRMTVSRCRHNSVVYDGKLYAIGGLGAAGNLDNVERYDT 685

  Fly   362 RKNKWSQGCAMLCKRSAVGVAALDDC---IYVCGGY-DGVTSLNTVEVYYPKSNTWKTV-AQMMK 421
            ..|:|.. .|.|.|  .|..||...|   |||.||. :...|...::.|.|::|.|..: :.|:.
Zfish   686 ITNQWEM-VAPLPK--PVHSAAATVCGGKIYVFGGVNEAGRSAGVLQSYVPQTNAWSFIESPMID 747

  Fly   422 YRSAGGVTQLNGYVYALGGHDGLSIFDSVERYDQAEDVW------VKMSPMLNR-RCRLGVATLN 479
            .:.|..|| ||||::.|||           .|.:|..::      :|..|.:|. |.......|:
Zfish   748 NKYAPAVT-LNGYIFILGG-----------AYARATTIYDPEKGNIKAGPNMNHSRQFCSAVVLD 800

  Fly   480 GKIYVCGGYCGNS--FLRSVECYDPQTDTWKLVTPMNC 515
            |||:..||...:.  .|.::|..||..:.|.|...|.|
Zfish   801 GKIFASGGIVSSEGPALGTMEALDPCANVWTLQQSMPC 838

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_001262494.1 BTB 29..135 CDD:279045 37/109 (34%)
PHA03098 36..510 CDD:222983 168/540 (31%)
BACK 143..245 CDD:285009 35/101 (35%)
Kelch 292..339 CDD:128874 14/46 (30%)
KELCH repeat 329..372 CDD:276965 17/42 (40%)
Kelch 340..386 CDD:128874 19/45 (42%)
KELCH repeat 376..417 CDD:276965 14/45 (31%)
Kelch 387..433 CDD:128874 16/50 (32%)
KELCH repeat 423..466 CDD:276965 13/48 (27%)
Kelch 435..480 CDD:128874 10/51 (20%)
Kelch_1 469..514 CDD:279660 13/47 (28%)
KELCH repeat 470..514 CDD:276965 13/45 (29%)
Kelch_1 517..560 CDD:279660
KELCH repeat 517..560 CDD:276965
LOC100334314XP_009291058.1 PHA03098 301..779 CDD:222983 155/493 (31%)
BTB 301..407 CDD:279045 34/105 (32%)
BACK 416..517 CDD:285009 35/100 (35%)
KELCH repeat 557..601 CDD:276965 1/43 (2%)
Kelch 565..616 CDD:128874 3/50 (6%)
KELCH repeat 606..649 CDD:276965 13/43 (30%)
Kelch 618..663 CDD:128874 14/45 (31%)
Kelch_1 653..697 CDD:279660 18/44 (41%)
KELCH repeat 653..697 CDD:276965 18/44 (41%)
Kelch_1 699..745 CDD:279660 14/45 (31%)
KELCH repeat 700..745 CDD:276965 14/44 (32%)
Kelch 760..801 CDD:128874 10/51 (20%)
Kelch_1 791..837 CDD:279660 13/45 (29%)
KELCH repeat 791..837 CDD:276965 13/45 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4441
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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