DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and klhl28

DIOPT Version :9

Sequence 1:NP_001262494.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:XP_017207216.1 Gene:klhl28 / 100333404 -ID:- Length:571 Species:Danio rerio


Alignment Length:532 Identity:209/532 - (39%)
Similarity:294/532 - (55%) Gaps:15/532 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 IRRMGKLCDVTLKVEDQTFSAHRVVLAATIPYFYAMFTNNMAESRIKEITMKESAIEPSALESLI 96
            :|:..:|||:.|:|.|....||:||||:..|||.||||.|::|....|:..:  .|:.:||::::
Zfish    28 LRQDHELCDIVLRVGDAKIHAHKVVLASISPYFKAMFTGNLSEKETSEVEFQ--CIDEAALKAIV 90

  Fly    97 NYVYSGQVRIDNQNVQNLMVGASFLQLSNVRDACASFLISRFHPHNVLGIRTFADSMICRQLIDA 161
            .|.|:|.|.|..:.|::|:..|:.||:..|...|.|||.|:....|.:||..||::..|..|..|
Zfish    91 EYAYTGTVFISQETVESLLPAANLLQVKLVLKECCSFLESQLDAGNCIGISRFAETYGCHDLCLA 155

  Fly   162 ADKYIDQNFAKVSQSEEFLALDCEQLLELMRRDELNVRTEEVIFEACMKWVKYAEDKRSELFPQV 226
            |.|:|.|:|.:|.|:|||..|...:|.:::..|.|||.|||.:|.|...|:||...:|.:...|:
Zfish   156 ASKFICQHFEEVCQTEEFFELTRAELDDIVSNDCLNVLTEESVFYALESWIKYDVSERQQHLAQL 220

  Fly   227 LAAVRLPLLSPQFLADRVAREELIRSSHQCRDLLDEAKDFHLMPERRGLLQS-FRTRQRSGEFFT 290
            |..|||||||.:||........|||..|.|:.||:||..:|.|||.|...|: ..||.|..   .
Zfish   221 LHCVRLPLLSVKFLTRLYEANHLIRDDHACKHLLNEALKYHFMPEHRLSYQTVLSTRPRCA---P 282

  Fly   291 GQIYAVGGLASTGESVSTVEIYDPLTKKWKMGEQMSMMRSRVGVAVLNGKLYAFGGFNGTERL-- 353
            ..:.||||.|....::.::|:|.|.|..|.....:.:.|...|||||..::|..||.....|.  
Zfish   283 KVLLAVGGKAGLFATLESMEMYFPQTDSWLGLAPLPVPRYEFGVAVLEQQVYVLGGIATHMRQGI 347

  Fly   354 ------STVEVYDPRKNKWSQGCAMLCKRSAVGVAALDDCIYVCGGYDGVTSLNTVEVYYPKSNT 412
                  |:||.:.|..|.||....|...||.:||..|...:|..|||||...|.:||.|.||...
Zfish   348 SYRRHESSVERWHPDTNTWSSERRMAESRSTLGVVVLAGELYALGGYDGQYYLQSVEKYLPKLKE 412

  Fly   413 WKTVAQMMKYRSAGGVTQLNGYVYALGGHDGLSIFDSVERYDQAEDVWVKMSPMLNRRCRLGVAT 477
            |:.||.|.|.||......|:|.:||:||: |.:..:||||||.::|.|..::||.::|...||..
Zfish   413 WQPVAPMTKSRSCFATAVLDGMIYAIGGY-GPAHMNSVERYDPSKDSWDMVAPMADKRINFGVGV 476

  Fly   478 LNGKIYVCGGYCGNSFLRSVECYDPQTDTWKLVTPMNCKRSRVALAANMGKLWAIGGYDGESNLS 542
            :.|.|:|.||:.|.|.|.|:|.|||..:.|....|||..|:.|..|.....|:.:||:.|.|.|:
Zfish   477 MLGFIFVVGGHNGVSHLSSIERYDPYQNQWTACRPMNEPRTGVGSAVVDNLLYVVGGHSGSSYLN 541

  Fly   543 TVEVYDPETDKW 554
            .|:.|||.||.|
Zfish   542 AVQRYDPLTDGW 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_001262494.1 BTB 29..135 CDD:279045 40/102 (39%)
PHA03098 36..510 CDD:222983 189/482 (39%)
BACK 143..245 CDD:285009 43/101 (43%)
Kelch 292..339 CDD:128874 16/46 (35%)
KELCH repeat 329..372 CDD:276965 17/50 (34%)
Kelch 340..386 CDD:128874 17/53 (32%)
KELCH repeat 376..417 CDD:276965 18/40 (45%)
Kelch 387..433 CDD:128874 20/45 (44%)
KELCH repeat 423..466 CDD:276965 17/42 (40%)
Kelch 435..480 CDD:128874 18/44 (41%)
Kelch_1 469..514 CDD:279660 18/44 (41%)
KELCH repeat 470..514 CDD:276965 18/43 (42%)
Kelch_1 517..560 CDD:279660 16/38 (42%)
KELCH repeat 517..560 CDD:276965 16/38 (42%)
klhl28XP_017207216.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59391
OrthoDB 1 1.010 - - D312716at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X9
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.930

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