DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and si:ch73-29c22.1

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_001429718.1 Gene:si:ch73-29c22.1 / 100332572 ZFINID:ZDB-GENE-091204-309 Length:325 Species:Danio rerio


Alignment Length:325 Identity:118/325 - (36%)
Similarity:154/325 - (47%) Gaps:9/325 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 LIRSSHQCRDLLDEAKDFHLMPERRGLLQSFRTRQRSGEFFTGQIYAVGGLASTGESVSTVEIYD 313
            ::.|...|   ..|.:|..|:........:.:.:..|....:..||.|||.:....| ..||.:.
Zfish     1 MMTSETNC---FKEDEDVLLIKYNTNTHSTKKNKAASKGKLSDMIYVVGGWSKDDPS-CPVEQFC 61

  Fly   314 PLTKKWKMGEQMSMMRSRVGVAVLNGKLYAFGGFNGTERLSTVEVYDPRKNKWSQGCAMLCK-RS 377
            ....:||....|...||..||..|:|.:|..||.:....||:||.|.|..|.|:.....|.. ||
Zfish    62 SQYNEWKFTAPMLHPRSDTGVCALDGDIYTVGGSDDVTCLSSVERYHPESNTWTVDVPSLSSPRS 126

  Fly   378 AVGVAALDDCIYVCGGYDGVTSLNTVEVYYPKSNTWKTVAQMMKYRSAGGVTQLNGYVYALGGHD 442
            .|.|..:|.|:...||:||:|.:||||.|.|..|:|..:..|::.|:|.....|||.:|.:||.|
Zfish   127 RVCVLEMDGCLITLGGFDGMTCINTVERYDPLKNSWSKLTPMLRNRAAASAAVLNGQIYVVGGTD 191

  Fly   443 GLSIFDSVERYDQAEDVWVKMSPMLNRRCRLGVATLNGKIYVCGG--YCGNSFLRSVECYDPQTD 505
            |....|||||:|..|..|.....|...|...|.|...|.:||.||  ..|.| |.:||.|||...
Zfish   192 GDMALDSVERFDPFEGCWSLCPTMSTPREASGCAVFLGCLYVAGGRDELGLS-LSNVERYDPDNF 255

  Fly   506 TWKLVTPMNCKRSRVALAANMGKLWAIGGYDGESNLSTVEVYDPETDKWTFMPPM-CAHSGGVGA 569
            .|..|..||.||.:|:|......|.||||.||.|:..|:|.||.||:.|.....| ..|.||..|
Zfish   256 RWSPVRAMNNKRFQVSLVVFNDFLLAIGGSDGVSDHKTMEAYDYETNSWRHFGSMKSKHPGGHAA 320

  Fly   570  569
            Zfish   321  320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556
PHA03098 36..510 CDD:222983 91/263 (35%)
KELCH repeat 329..372 CDD:276965 17/42 (40%)
KELCH repeat 376..417 CDD:276965 19/40 (48%)
KELCH repeat 423..466 CDD:276965 18/42 (43%)
KELCH repeat 470..514 CDD:276965 18/45 (40%)
Kelch_1 517..560 CDD:396078 18/42 (43%)
KELCH repeat 517..560 CDD:276965 18/42 (43%)
si:ch73-29c22.1NP_001429718.1 None
Blue background indicates that the domain is not in the aligned region.

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