DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and klhl20

DIOPT Version :9

Sequence 1:NP_001262494.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_001135481.1 Gene:klhl20 / 100216018 XenbaseID:XB-GENE-960635 Length:234 Species:Xenopus tropicalis


Alignment Length:193 Identity:72/193 - (37%)
Similarity:109/193 - (56%) Gaps:10/193 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 YKHDKLFGESFPLFKEIRRMGKLCDVTLKVEDQTFSAHRVVLAATIPYFYAMFTNNMAESRIKEI 80
            |..||...::..:...:|:..:||||.|.|..:...||||:|:|..|||.||||..:||||..|:
 Frog    45 YVSDKHPRQTLEVINLLRKHRELCDVVLVVGAKKIYAHRVILSACSPYFRAMFTGELAESRQTEV 109

  Fly    81 TMKESAIEPSALESLINYVYSGQVRIDNQNVQNLMVGASFLQLSNVRDACASFLISRFHPHNVLG 145
            .:::  |:..|:|.||::.|:.|:.::..|||.|:..|..|||:.:::||..||..:..|.|.||
 Frog   110 VIRD--IDERAMELLIDFSYTSQITVEEGNVQTLLPAACLLQLAEIQEACCEFLKRQLDPSNCLG 172

  Fly   146 IRTFADSMICRQLIDAADKYIDQNFAKVSQSEEFLALDCEQLLELMRRDELNVRTEEVIFEAC 208
            ||.|||:..||:|:..|||:...||.:|..|..|..|:...:|.        ..|:..:..||
 Frog   173 IRAFADTHSCRELLRIADKFTQHNFQEVRDSVLFRKLNSAYVLV--------ANTQYGVMTAC 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_001262494.1 BTB 29..135 CDD:279045 43/105 (41%)
PHA03098 36..510 CDD:222983 68/173 (39%)
BACK 143..245 CDD:285009 23/66 (35%)
Kelch 292..339 CDD:128874
KELCH repeat 329..372 CDD:276965
Kelch 340..386 CDD:128874
KELCH repeat 376..417 CDD:276965
Kelch 387..433 CDD:128874
KELCH repeat 423..466 CDD:276965
Kelch 435..480 CDD:128874
Kelch_1 469..514 CDD:279660
KELCH repeat 470..514 CDD:276965
Kelch_1 517..560 CDD:279660
KELCH repeat 517..560 CDD:276965
klhl20NP_001135481.1 BTB 59..162 CDD:279045 43/104 (41%)
BTB 69..165 CDD:197585 41/97 (42%)
BACK_Kelch 165..>203 CDD:269808 18/37 (49%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D312716at33208
OrthoFinder 1 1.000 - - FOG0000036
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X9
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

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