DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and klhl41a

DIOPT Version :9

Sequence 1:NP_001262494.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:XP_001922967.1 Gene:klhl41a / 100148315 ZFINID:ZDB-GENE-081105-22 Length:599 Species:Danio rerio


Alignment Length:563 Identity:144/563 - (25%)
Similarity:250/563 - (44%) Gaps:33/563 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 KEIRRMGKLCDVTLKVEDQTFSAHRVVLAATIPYFYAM-FTNNMAESR--IKEITMKESAIEPSA 91
            ||:.:..|..|..|||.|::...||:::||..|||..: ||.:..|.:  .||:.::.  ::|:.
Zfish    23 KELLKENKFVDCILKVGDRSLPCHRLIMAACSPYFRELYFTEDGTEKKDANKEVVLEN--VDPNI 85

  Fly    92 LESLINYVYSGQVRIDNQNVQNLMVGASFLQLSNVRDACASFLISRFHPHNVLGIRTFADSMICR 156
            ::.::||:||..:.|.:.|||::...|:..|:.:|...|.::|.::....|.|.|......:.|.
Zfish    86 MDMIVNYLYSADIDITDDNVQDVFAVANKFQIPSVFTVCVNYLQNKLSLGNCLAIFRMGLVLNCP 150

  Fly   157 QLIDAADKYIDQNFAKVSQSEEFLALDCEQLLELMRRDELNVRTEEVIFEACMKWVKYAEDKRSE 221
            :|..:|..:|.::|..:|:.||||..:..:...::..|.|||..||::||..||||:..::.|::
Zfish   151 RLAVSARDFIAEHFETLSKDEEFLEFNAPEFFAIIGCDALNVEKEELVFELLMKWVRKNKENRAK 215

  Fly   222 LFPQVLAAVRLPLLSPQFLADRVAREELIRSSHQCRDLLDEAKDFHL--MP-----ERRG----- 274
            ........:|..||..::|.::|.::::|::..:....|...||...  :|     |:.|     
Zfish   216 ALGDAFEHIRFRLLPEKYLKEKVEKDDIIKADPELIKKLKVIKDAFAGKLPQIKEGEKEGEGENE 280

  Fly   275 LLQSFRTRQRSGEFFTGQIYAVGGLASTGESVSTVEIYDPLTKKWKMGEQMSMMRSRVGVAVLNG 339
            |.......||.|.|....|..:...|:.....:..|.:     ...|.||:.  |:.|.:.....
Zfish   281 LPGFLNDSQRLGMFNRDLILMINDTAAVAYDANENECF-----LAAMAEQIP--RNHVSITSKKN 338

  Fly   340 KLYAFGGF--NGTERLSTVEVY----DPRKNKWSQGCAMLCKRSAVGVAALDDCIYVCGGYD--G 396
            .||..||.  :...:.|.::.|    ||....|.....|...|....:...::.::...|.|  .
Zfish   339 LLYVAGGLFVDEENKDSPLQCYFYQMDPHSPNWIALPPMPSPRCLFAMGEFENLLFAVAGKDLQS 403

  Fly   397 VTSLNTVEVYYPKSNTWKTVAQMMKYRSAGGVTQLNGYVYALGGH-DGLSIFDSVERYDQAEDVW 460
            ..||::|..|......|....::........|...||.||.:||. |.....:.:..|:..:..|
Zfish   404 NESLDSVLCYDVDKMKWLETKKLPLRIHGHSVISQNGLVYCIGGKTDENKTINKMFAYNHKKSEW 468

  Fly   461 VKMSPMLNRRCRLGVATLNGKIYVCGGYCGNSFLRSVECYDPQTDTWKLVTPMNCKRSRVALAAN 525
            .:::.|...|...|.....|||.|.||...:..|.|.|.||..|:.|::......:||.|.:.:.
Zfish   469 KELAAMKTPRSMFGATVHKGKIVVVGGVNEDGLLSSCEAYDFGTNKWEVFAEFA
QERSSVNVLSV 533

  Fly   526 MGKLWAIGGYDGESNLSTVEVYDPETDKWTFMPPMCAHSGGVG 568
            .|.|:|:.|:..:.|.....|....||.|.:.......||.:|
Zfish   534 DGVLYAVAGFTIKENEDKQCVPSEITDIWQYEEDKKQWSGMIG 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_001262494.1 BTB 29..135 CDD:279045 33/107 (31%)
PHA03098 36..510 CDD:222983 127/497 (26%)
BACK 143..245 CDD:285009 29/101 (29%)
Kelch 292..339 CDD:128874 8/46 (17%)
KELCH repeat 329..372 CDD:276965 11/48 (23%)
Kelch 340..386 CDD:128874 11/51 (22%)
KELCH repeat 376..417 CDD:276965 8/42 (19%)
Kelch 387..433 CDD:128874 8/47 (17%)
KELCH repeat 423..466 CDD:276965 10/43 (23%)
Kelch 435..480 CDD:128874 10/45 (22%)
Kelch_1 469..514 CDD:279660 15/44 (34%)
KELCH repeat 470..514 CDD:276965 15/43 (35%)
Kelch_1 517..560 CDD:279660 12/42 (29%)
KELCH repeat 517..560 CDD:276965 12/42 (29%)
klhl41aXP_001922967.1 BTB 22..129 CDD:279045 33/107 (31%)
PHA03098 46..521 CDD:222983 121/483 (25%)
BACK 137..239 CDD:285009 29/101 (29%)
KELCH repeat 328..377 CDD:276965 11/48 (23%)
Kelch 339..391 CDD:128874 11/51 (22%)
Kelch_1 380..420 CDD:279660 7/39 (18%)
Kelch_6 431..478 CDD:290672 11/46 (24%)
KELCH repeat 431..474 CDD:276965 10/42 (24%)
Kelch_1 477..520 CDD:279660 15/42 (36%)
KELCH repeat 478..522 CDD:276965 15/43 (35%)
KELCH repeat 525..578 CDD:276965 15/52 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4441
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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