DRSC/TRiP Functional Genomics Resources

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Protein Alignment KLHL18 and ivns1abp

DIOPT Version :9

Sequence 1:NP_001262494.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:XP_012816907.1 Gene:ivns1abp / 100145550 XenbaseID:XB-GENE-949332 Length:665 Species:Xenopus tropicalis


Alignment Length:614 Identity:184/614 - (29%)
Similarity:287/614 - (46%) Gaps:72/614 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 EDQYFVYKHDKLFGESFPLFKEIRRMGKLCDVTLKVEDQTFSAHRVVLAATIPYFYAMFTNNMAE 74
            ||:.|:       ..|......:|:.|:.|||.|:|......|||.|||...|:.:.:|.::...
 Frog    37 EDEQFI-------ESSVAKLNALRKSGQFCDVKLQVCGHEMLAHRAVLACCSPFLFEIFNSDGES 94

  Fly    75 SRIKEITMKESAIEPSALESLINYVYSGQVRIDNQNVQNLMVGASFLQLSNVRDACASFLISRFH 139
            ..|..:...:  :.|.|:|.|:||.|:.|::.:...|:::...|..|::..|:..|..:|:|:..
 Frog    95 HGISLVRFDD--LNPDAVEVLLNYAYTSQLKAETDLVKDVYSAAKKLKIDRVKQVCGDYLLSKID 157

  Fly   140 PHNVLGIRTFADSMICRQLIDAADKYIDQNFAKVSQSEEFLALDCEQLLELMRRDELNVRTEEVI 204
            ..:.:..|.|.::|...:|:...|.||.::..::|:.|:||.|. ...||:|..:.:::.:...:
 Frog   158 VQSCISYRNFVNAMGDWRLLSKIDNYIQEHLLEISEQEDFLKLP-RLNLEIMLEENVSLPSNGKL 221

  Fly   205 FEACMKWVKYAEDKRSELFPQVLAAVRL-------PLLSPQFLADRV-AREELIR---------S 252
            :...:.||:.:..:..|....:|..|:.       .||....|.:.. |.|:.|:         :
 Frog   222 YTKVINWVQRSIWENGENLDALLEEVQTLYYSADHKLLDASLLGEHTDAYEDNIQLIQKKSPREN 286

  Fly   253 SHQCRDLLDEAKDFHLMPERRGLLQSFRTRQR--SGEFFTGQIY----------AVGGLASTGES 305
            :|:   .|..:....|.|  ..|.||.:...:  :.|..|...|          .|..|......
 Frog   287 NHK---NLSSSSSGSLSP--TALTQSPKHEWKIIASEKKTNNTYLCLAVLNSMLCVIFLHGRNSP 346

  Fly   306 VSTVEIYDPLTKKWKMGEQ--------MSMM---RSRVGVAVLNGKLYAFGGFNGTERLSTVEVY 359
            |::......|||...:..|        ||.|   ||.:|.|.|||||.|.||:|..|.|.|||.|
 Frog   347 VNSPSSTPRLTKSLSLEIQPDDSLERVMSPMHYARSGLGTAELNGKLIAAGGYNREECLRTVECY 411

  Fly   360 DPRKNKWSQGCAMLCKRSAVGVAALDDCIYVCGGYDGVT-SLNTVEVYYPKSNTWKTVAQMMKYR 423
            ||..:.|:....|...|:...:|.|.|.:||.||.:|.: .|:..|.|.||||.|.:|.::...|
 Frog   412 DPETDIWTFIAPMKTPRARFQMAVLMDHLYVVGGSNGHSDDLSCGEKYDPKSNVWISVPELRSNR 476

  Fly   424 SAGGVTQLNGYVYALGGHD-----GL---SIFDSVERYDQAEDVWVKMSPMLNRRCRLGVATLNG 480
            ...||..|||.:|.:||.|     ||   .:||.:.|      :|...:.:..||.:..|..|..
 Frog   477 CNAGVCALNGKLYVVGGSDPYGQKGLKNCDVFDPITR------MWTCCAQLNIRRHQSAVCELGN 535

  Fly   481 KIYVCGGYCGNSFLRSVECYDPQTDTWKLVTPMNCKRSRVALAANMGKLWAIGGYDGESNLSTVE 545
            |:|:.||....:.|.|||||:|:.|||.||.|||..|....:|...|||:.:||:||...||.||
 Frog   536 KMYIIGGAESWNCLNSVECYNPENDTWTLVAPMNVARRGAGVAVYEGKLFVVGGFDGTHALSCVE 600

  Fly   546 VYDPETDKWTFMPPMCAHSGGVGAGVIRI 574
            .||||.::|..|..|.  |....||::.:
 Frog   601 SYDPERNEWKMMGSMT--SARSNAGMVAV 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_001262494.1 BTB 29..135 CDD:279045 29/105 (28%)
PHA03098 36..510 CDD:222983 151/522 (29%)
BACK 143..245 CDD:285009 23/109 (21%)
Kelch 292..339 CDD:128874 16/67 (24%)
KELCH repeat 329..372 CDD:276965 22/42 (52%)
Kelch 340..386 CDD:128874 19/45 (42%)
KELCH repeat 376..417 CDD:276965 17/41 (41%)
Kelch 387..433 CDD:128874 18/46 (39%)
KELCH repeat 423..466 CDD:276965 16/50 (32%)
Kelch 435..480 CDD:128874 14/52 (27%)
Kelch_1 469..514 CDD:279660 21/44 (48%)
KELCH repeat 470..514 CDD:276965 20/43 (47%)
Kelch_1 517..560 CDD:279660 19/42 (45%)
KELCH repeat 517..560 CDD:276965 19/42 (45%)
ivns1abpXP_012816907.1 BTB_POZ_NS1BP 41..164 CDD:349615 33/131 (25%)
PHA03098 50..665 CDD:222983 180/594 (30%)
KELCH repeat 381..424 CDD:276965 22/42 (52%)
KELCH repeat 428..473 CDD:276965 18/44 (41%)
KELCH repeat 476..521 CDD:276965 16/50 (32%)
KELCH repeat 525..568 CDD:276965 19/42 (45%)
KELCH repeat 572..616 CDD:276965 19/43 (44%)
KELCH repeat 619..662 CDD:276965 2/9 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D312716at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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