DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KLHL18 and kbtbd3

DIOPT Version :9

Sequence 1:NP_001262494.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:XP_001342878.1 Gene:kbtbd3 / 100003277 ZFINID:ZDB-GENE-131016-5 Length:595 Species:Danio rerio


Alignment Length:590 Identity:156/590 - (26%)
Similarity:248/590 - (42%) Gaps:66/590 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VEDQYFVYKHDKLFGES-FPLFKEIRRMGKLCDVTLKVEDQTFSAHRVVLAATIPYFYAMFTNNM 72
            |..|..|:...:..|:. ..:.:..|:...|.|.::.|:|:|...||.||||...:|.|||..:|
Zfish     3 VSPQRCVFLRCECVGQQIISVLQGFRQRKLLLDFSIHVQDETLLCHRCVLAACSHFFRAMFELDM 67

  Fly    73 AESRIKEITMKESAIEPSALESLINYVYSGQVRIDNQNVQNLMVGASFLQLSNVRDACASFLISR 137
            .|.....:|:  |.:...|:.:.:::.|||::.:...||:.|...|||||:..:..:|:.||:..
Zfish    68 RECVDGSVTL--SNLSAQAVHTFLDFAYSGEIEVREDNVEMLFQMASFLQVDFLLRSCSDFLLES 130

  Fly   138 FHPHNVLGIRTFADSMICRQLIDAADKYIDQNFAKVSQSEEFLALDCEQLLELMRRDELNVRTEE 202
            ....|.|.:...|:.....||:..|..:|.|||..||.|.|||.|....|..::..|||.|..||
Zfish   131 LDVSNCLHLLELAEGYGSTQLLRGAIDFITQNFQTVSCSVEFLELPSPVLERVLLSDELRVPDEE 195

  Fly   203 VIFEACMKWVKYAEDKRSELFPQVLAAVRLPLLSPQFLADRVAREELIRSSHQCRDLLDEAKDFH 267
            .:.:|.:.|||:....|:.|..|:||.|||..: |....:..|:.:::  :.:||::|..|    
Zfish   196 TVLQALLCWVKHDPSTRTSLMQQLLACVRLHHI-PIATLENAAQSDML--TDECRNMLTHA---- 253

  Fly   268 LMPERRGLLQSFRTRQRSGEFFTGQIYAVGG---LASTGESVSTVEIYDPLTKKWKMGEQMSMMR 329
                   |.|   |:|.||.|...::.....   :..|.||:.....|:.::.:|....:.:|..
Zfish   254 -------LAQ---TQQFSGLFTDARVSTTSTYIFVHKTEESMRHTFCYEIVSDRWTPLPEDAMRI 308

  Fly   330 SRVGVAVLNG---KLYAFGGFNGT--------------ERLSTVEVYDPRKNKWSQGCAMLCKRS 377
            ..:..:|:..   ||:..||.:..              |.......|.|..:.::....|...|:
Zfish   309 LELPGSVMTSFAEKLFISGGCHSDCPRSIRTHISSPHHEATDEFWCYCPIAHSFTPAPRMRHTRT 373

  Fly   378 A-VGVAALDDCIYVCGGYD----GVTSLNTVEVYYPKSNTWKTVAQMMKYRSAGGVTQLNGYVYA 437
            . ..|.||.. :||.||..    .|.|:..|:.|.|....|.:|:.:.|.......:.....:||
Zfish   374 MHTCVVALQR-LYVIGGKPRSSRNVPSIVDVDYYDPLMREWISVSPLPKGIYFPEASVCGNVIYA 437

  Fly   438 LGGHDGLS-----IFDSVERYDQAEDVW----VKMSPMLNRRCRLGVATLNGKIYVC--GGYCGN 491
            ||.....|     :.|...|||...|.|    .:.....:.|....|. :|..:|:|  ..|...
Zfish   438 LGSEVEFSDAFNPLLDCFFRYDAVADQWSHLVAEFGQFFHARLVKSVC-VNETLYLCDLSTYKVY 501

  Fly   492 SFLRSVECYDPQTDTWKLVTPMNCKRSRVALAANMGKLWAIGG-YDGESNLSTVEVYDPETDKWT 555
            ||     |.|  ...||......|.....|.....||::.:|| |..:.....|:|||....:|.
Zfish   502 SF-----CAD--EGVWKGEGSFECAGFNAAAVGVRGKIFILGGDYSPDEISDEVQVYDSSRSEWQ 559

  Fly   556 FMPPM 560
            .:.||
Zfish   560 EVSPM 564

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_001262494.1 BTB 29..135 CDD:279045 34/105 (32%)
PHA03098 36..510 CDD:222983 137/509 (27%)
BACK 143..245 CDD:285009 36/101 (36%)
Kelch 292..339 CDD:128874 7/49 (14%)
KELCH repeat 329..372 CDD:276965 8/59 (14%)
Kelch 340..386 CDD:128874 12/60 (20%)
KELCH repeat 376..417 CDD:276965 14/45 (31%)
Kelch 387..433 CDD:128874 12/49 (24%)
KELCH repeat 423..466 CDD:276965 11/51 (22%)
Kelch 435..480 CDD:128874 13/53 (25%)
Kelch_1 469..514 CDD:279660 12/46 (26%)
KELCH repeat 470..514 CDD:276965 12/45 (27%)
Kelch_1 517..560 CDD:279660 11/43 (26%)
KELCH repeat 517..560 CDD:276965 11/43 (26%)
kbtbd3XP_001342878.1 BTB 24..128 CDD:279045 34/105 (32%)
PHA03098 37..558 CDD:222983 146/548 (27%)
BACK 136..235 CDD:197943 36/99 (36%)
KELCH repeat 316..368 CDD:276965 7/51 (14%)
Kelch_1 372..420 CDD:279660 15/48 (31%)
KELCH repeat 372..419 CDD:276965 15/47 (32%)
KELCH repeat 423..496 CDD:276965 16/73 (22%)
KELCH repeat 520..565 CDD:276965 13/45 (29%)
Kelch_1 522..565 CDD:279660 13/43 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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