DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KLHL18 and kbtbd3

DIOPT Version :10

Sequence 1:NP_650143.1 Gene:KLHL18 / 41458 FlyBaseID:FBgn0037978 Length:575 Species:Drosophila melanogaster
Sequence 2:XP_073780249.1 Gene:kbtbd3 / 100003277 ZFINID:ZDB-GENE-131016-5 Length:615 Species:Danio rerio


Alignment Length:590 Identity:156/590 - (26%)
Similarity:248/590 - (42%) Gaps:66/590 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VEDQYFVYKHDKLFGES-FPLFKEIRRMGKLCDVTLKVEDQTFSAHRVVLAATIPYFYAMFTNNM 72
            |..|..|:...:..|:. ..:.:..|:...|.|.::.|:|:|...||.||||...:|.|||..:|
Zfish    23 VSPQRCVFLRCECVGQQIISVLQGFRQRKLLLDFSIHVQDETLLCHRCVLAACSHFFRAMFELDM 87

  Fly    73 AESRIKEITMKESAIEPSALESLINYVYSGQVRIDNQNVQNLMVGASFLQLSNVRDACASFLISR 137
            .|.....:|:  |.:...|:.:.:::.|||::.:...||:.|...|||||:..:..:|:.||:..
Zfish    88 RECVDGSVTL--SNLSAQAVHTFLDFAYSGEIEVREDNVEMLFQMASFLQVDFLLRSCSDFLLES 150

  Fly   138 FHPHNVLGIRTFADSMICRQLIDAADKYIDQNFAKVSQSEEFLALDCEQLLELMRRDELNVRTEE 202
            ....|.|.:...|:.....||:..|..:|.|||..||.|.|||.|....|..::..|||.|..||
Zfish   151 LDVSNCLHLLELAEGYGSTQLLRGAIDFITQNFQTVSCSVEFLELPSPVLERVLLSDELRVPDEE 215

  Fly   203 VIFEACMKWVKYAEDKRSELFPQVLAAVRLPLLSPQFLADRVAREELIRSSHQCRDLLDEAKDFH 267
            .:.:|.:.|||:....|:.|..|:||.|||..: |....:..|:.:::  :.:||::|..|    
Zfish   216 TVLQALLCWVKHDPSTRTSLMQQLLACVRLHHI-PIATLENAAQSDML--TDECRNMLTHA---- 273

  Fly   268 LMPERRGLLQSFRTRQRSGEFFTGQIYAVGG---LASTGESVSTVEIYDPLTKKWKMGEQMSMMR 329
                   |.|   |:|.||.|...::.....   :..|.||:.....|:.::.:|....:.:|..
Zfish   274 -------LAQ---TQQFSGLFTDARVSTTSTYIFVHKTEESMRHTFCYEIVSDRWTPLPEDAMRI 328

  Fly   330 SRVGVAVLNG---KLYAFGGFNGT--------------ERLSTVEVYDPRKNKWSQGCAMLCKRS 377
            ..:..:|:..   ||:..||.:..              |.......|.|..:.::....|...|:
Zfish   329 LELPGSVMTSFAEKLFISGGCHSDCPRSIRTHISSPHHEATDEFWCYCPIAHSFTPAPRMRHTRT 393

  Fly   378 A-VGVAALDDCIYVCGGYD----GVTSLNTVEVYYPKSNTWKTVAQMMKYRSAGGVTQLNGYVYA 437
            . ..|.||.. :||.||..    .|.|:..|:.|.|....|.:|:.:.|.......:.....:||
Zfish   394 MHTCVVALQR-LYVIGGKPRSSRNVPSIVDVDYYDPLMREWISVSPLPKGIYFPEASVCGNVIYA 457

  Fly   438 LGGHDGLS-----IFDSVERYDQAEDVW----VKMSPMLNRRCRLGVATLNGKIYVC--GGYCGN 491
            ||.....|     :.|...|||...|.|    .:.....:.|....|. :|..:|:|  ..|...
Zfish   458 LGSEVEFSDAFNPLLDCFFRYDAVADQWSHLVAEFGQFFHARLVKSVC-VNETLYLCDLSTYKVY 521

  Fly   492 SFLRSVECYDPQTDTWKLVTPMNCKRSRVALAANMGKLWAIGG-YDGESNLSTVEVYDPETDKWT 555
            ||     |.|  ...||......|.....|.....||::.:|| |..:.....|:|||....:|.
Zfish   522 SF-----CAD--EGVWKGEGSFECAGFNAAAVGVRGKIFILGGDYSPDEISDEVQVYDSSRSEWQ 579

  Fly   556 FMPPM 560
            .:.||
Zfish   580 EVSPM 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KLHL18NP_650143.1 BTB_POZ_KLHL18 20..137 CDD:349556 36/117 (31%)
PHA03098 36..510 CDD:222983 137/509 (27%)
KELCH repeat 329..372 CDD:276965 8/59 (14%)
KELCH repeat 376..417 CDD:276965 14/45 (31%)
KELCH repeat 423..466 CDD:276965 11/51 (22%)
KELCH repeat 470..514 CDD:276965 12/45 (27%)
Kelch_1 517..560 CDD:396078 11/43 (26%)
KELCH repeat 517..560 CDD:276965 11/43 (26%)
kbtbd3XP_073780249.1 None

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