DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ect3 and Bin2a

DIOPT Version :9

Sequence 1:NP_650142.1 Gene:Ect3 / 41457 FlyBaseID:FBgn0260746 Length:637 Species:Drosophila melanogaster
Sequence 2:NP_001009524.2 Gene:Bin2a / 494244 RGDID:1359233 Length:637 Species:Rattus norvegicus


Alignment Length:610 Identity:206/610 - (33%)
Similarity:307/610 - (50%) Gaps:47/610 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 KD-QFLKDGEPFRFIAGSFHYFRAHPATWQRHLRTMRAAGLNAVTTYVEWSLHNPRDGVYVWSGI 93
            || ||..:|.|||.|:|:..|||.....|::.||.|:|.|.|.:||::.|:||.|..|.:.:...
  Rat    54 KDSQFTLEGFPFRIISGAIDYFRVPRQNWRQSLRKMQACGFNTLTTHIPWNLHEPTMGRFQFIEN 118

  Fly    94 ADLEHFIRLAVGEDLLVILRPGPYICAERDMGGFPYWLLNKYPGIQLRTADVNYLSEIRIWYTQL 158
            .||..||.:|....|.|||.|||||..:.|:||.|.||| |.|.::|||....:...:..::..|
  Rat   119 MDLVAFITMASETGLWVILCPGPYIGGDIDLGGLPSWLL-KDPKMKLRTTYKGFTKAMNRYFNNL 182

  Fly   159 FAKMNKYLYGNGGPIIMVQVENEYGSFYACDLNYRNWLRDETESHVKGQAVLFTNDGPSVLRCGK 223
            ..::.:..|..|||||.|||||||||:| .|..|..:::....|....:.::..:||.| ||.|.
  Rat   183 IPRIAQLQYNKGGPIIAVQVENEYGSYY-MDKKYMEYVKTALVSRGIDELLMTADDGVS-LRKGH 245

  Fly   224 IQGVLATMDFGATNDLKPIWAKFRRYQPKGPLVNAEYYPGWLTHWTEPMANVSTQSITSTFINML 288
            :|.||||:.....|  |..:..|:..|.:.|::...|.......|.........|.:......:.
  Rat   246 LQNVLATVRMKNIN--KETYEDFKFIQGRSPILMTVYTTNSFDTWGALRQLGDPQMLMKDVREIF 308

  Fly   289 DHGASVNFYMFYGGTNFGFTAGANDIGPGNYMADITSYDYDAPMTEAGDPTPKYQALRRIIGRYL 353
            :.|.|:|||||.||||||...||.  ....|...:|||||.|.:||.||.||:||..:|......
  Rat   309 NLGFSLNFYMFQGGTNFGLIGGAQ--SAEGYTPVVTSYDYCALITENGDYTPEYQEFQRFFHSVT 371

  Fly   354 PLPNQPVPGPVPKRSYGTVRLTTCCSLLSSEARSRLSTGFVQSAKPKSFEAL------GQYSGLV 412
            ..  .|:..|....::....||....:...|....| ....:|::|.|.|.|      ||..|.:
  Rat   372 DF--SPLTRPKATLTFAYQPLTLLYYMTLWEVLPYL-VKTTKSSRPLSMEQLTVNGRSGQSFGYI 433

  Fly   413 LYETWLPSFQRDPSILSVPG-LADRGYVYVDGEFVGILARETPVFELPLSASAGRRFQ---IIVE 473
            ||||.:    .:..:|:..| :.||..|::|.::||:|.|...  ||.|.....::.|   |:||
  Rat   434 LYETTI----FNGGLLTSRGHIQDRAQVFLDKDYVGLLDRSNK--ELLLYKDLTKKTQTLRILVE 492

  Fly   474 NQGRINYGRQLN-DFKGILRDVRLDKQVLSNWNMTQFPLESYDNLEQLITQSDEAVRQGFQELKK 537
            ||||:..|:.:| :.||:..|:.|||..|.       |.:.|.     :...:..:::.|.:..|
  Rat   493 NQGRLTSGQDMNKERKGLTGDIYLDKSPLR-------PFKIYS-----LEMGNVFIQREFPKYWK 545

  Fly   538 LRTMLRTGPAIYHGQLDIQKESD-LADTYLDMSGWGKGIVFVNGENLGRYWPLVGPQVTLYVPAA 601
            ..|....|||.:...|   |..| ..||::.:..||||::.:||.:|||||. :|||.|::||.:
  Rat   546 TATSPVMGPAFFLSHL---KAGDPPQDTFIQVKDWGKGVIAINGRSLGRYWN-IGPQETIFVPGS 606

  Fly   602 VLKAGSNRLVVVEYQQTPASQELHF 626
            .|..|.|.:::  :::.....::||
  Rat   607 WLHPGVNTIIM--FEELKGGVKIHF 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ect3NP_650142.1 Glyco_hydro_35 32..350 CDD:279624 121/317 (38%)
BetaGal_dom4_5 <576..616 CDD:290101 16/39 (41%)
Bin2aNP_001009524.2 AmyAc_family 57..368 CDD:422958 121/317 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166346748
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1874
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52178
OrthoDB 1 1.010 - - D179316at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100579
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.660

Return to query results.
Submit another query.