DRSC/TRiP Functional Genomics Resources

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Protein Alignment mfas and FLA18

DIOPT Version :10

Sequence 1:NP_788655.1 Gene:mfas / 41455 FlyBaseID:FBgn0260745 Length:905 Species:Drosophila melanogaster
Sequence 2:NP_566398.1 Gene:FLA18 / 820342 AraportID:AT3G11700 Length:462 Species:Arabidopsis thaliana


Alignment Length:231 Identity:47/231 - (20%)
Similarity:90/231 - (38%) Gaps:66/231 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   709 MNRATVNCARLVHF-------DDESCGSVLHQVDRALAPPKNNMLKLLEANPNYSKFLELVRKAN 766
            |:|....|:.:..|       :..:..|..|.:..:.....|::|..| .:..|::..|||.||.
plant     1 MDRCIYGCSVITIFFSFFFLLNASALESGHHNITGSGQINSNSVLVAL-LDSRYTELAELVEKAL 64

  Fly   767 LTQLLSN--DSRSLTLLVPKNDIFEELNESGEGSKPADP---------------MALVKTHIVED 814
            |.|.|.:  ...::|:..|:|:..|         :..||               ..|:.:||:..
plant    65 LLQTLEDAVGRHNITIFAPRNEALE---------RDLDPDFKRFLLQPGNLKSLQTLLLSHIIPK 120

  Fly   815 VVCCAGIIPTNWPFVRSIESISG--QHLRITRDR------------RPKIENAGVTK-CDVVATN 864
            .|.     ...||     |..||  :|:.:..|:            :..:.:|.:|: .|:...:
plant   121 RVG-----SNQWP-----EENSGRVKHVTLGHDQVLHLSKLKGTNGKRLVNSAVITRPDDLTRPD 175

  Fly   865 GILHEINDIIVPRPQRQQQQRPQ-------LIPPGA 893
            |::|.|..:::||..::...|.:       ::|.||
plant   176 GLIHGIERLLIPRSVQEDFNRRRNLRSISAVLPEGA 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mfasNP_788655.1 FAS1 339..450 CDD:214719
Fasciclin 462..592 CDD:396845
Fasciclin 607..740 CDD:396845 6/37 (16%)
Fasciclin 753..875 CDD:396845 32/153 (21%)
FLA18NP_566398.1 Fasciclin 51..187 CDD:396845 32/154 (21%)
FAS1 312..416 CDD:214719
Blue background indicates that the domain is not in the aligned region.

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