DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mfas and Tgfbi

DIOPT Version :9

Sequence 1:NP_788655.1 Gene:mfas / 41455 FlyBaseID:FBgn0260745 Length:905 Species:Drosophila melanogaster
Sequence 2:NP_033395.1 Gene:Tgfbi / 21810 MGIID:99959 Length:683 Species:Mus musculus


Alignment Length:730 Identity:164/730 - (22%)
Similarity:302/730 - (41%) Gaps:139/730 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   191 GAAQEPW------------WKGPNVCTEKEEDETVASETEAEETVDTFGQERDGVTNVVRSPLFG 243
            |.|:.|:            ..|||||..::                ..|..:...||        
Mouse    24 GPAKSPYQLVLQHSRLRGRQHGPNVCAVQK----------------VIGTNKKYFTN-------- 64

  Fly   244 QFQFSVNSCAEKPNKHVCTKIVNQNGKKKTLTLTRQCCYGYGRPRNADFTTPCEK-----IDIKD 303
                    |.:...:.:|         .|:..::.:||.||.:       .|.||     :.:.:
Mouse    65 --------CKQWYQRKIC---------GKSTVISYECCPGYEK-------VPGEKGCPAALPLSN 105

  Fly   304 VEATASDMGAKQF-LESARTAGELADMLGAGSGKKVTLFVPNDAAF----MEYRGHHQQENNVED 363
            :..|...:|:... |.:.||.....:|.|.||   .|:|.|::.|:    .|.........|:|.
Mouse   106 LYETMGVVGSTTTQLYTDRTEKLRPEMEGPGS---FTIFAPSNEAWSSLPAEVLDSLVSNVNIEL 167

  Fly   364 AKAEASKPSIYKLHAVLGEVQLEDVPNEKLLQTELPDQKIRINSYQLPAALGLEPYRFAANCVPI 428
            ..|       .:.|.|...|..:::.:...|.:...:..|:|:.|  |..:      ...||..:
Mouse   168 LNA-------LRYHMVDRRVLTDELKHGMTLTSMYQNSNIQIHHY--PNGI------VTVNCARL 217

  Fly   429 EKHDKLSEQALVHTLGGVLKPLTKNLMDIIRERADMSIMRTVLEKTNLSAMLEDDKPVTIFVPTD 493
            .|.|..:...:||.:..|:..:|.|:..||........:|..:..:.|:.:||.|...|:..||:
Mouse   218 LKADHHATNGVVHLIDKVISTITNNIQQIIEIEDTFETLRAAVAASGLNTVLEGDGQFTLLAPTN 282

  Fly   494 AAFDKLEPH-LRRALKEGRGCASNILKNHLLDLTFCSLATVPGAKTTAYNLLGEPLLLNRTHRAA 557
            .||:|:... |.|.|.:.. ...::|.||:|....|:.|.|.|   .:...||...|        
Mouse   283 EAFEKIPAETLNRILGDPE-ALRDLLNNHILKSAMCAEAIVAG---MSMETLGGTTL-------- 335

  Fly   558 NQTGPT--PIYINNLAKIIDADIMGTNGVLHVIDTILPTESALPMTSLMSQKNLTIFQRLLEASG 620
             :.|.:  .:.||..|.|.:.||:.||||:|.||.:|..:||..:..|..:.:::....:|:.:|
Mouse   336 -EVGCSGDKLTINGKAVISNKDILATNGVIHFIDELLIPDSAKTLLELAGESDVSTAIDILKQAG 399

  Fly   621 YDDQFDDLDNVTIFAPTDKALQNTEWARMLKEQPELLNHNLDLLEFLNYHVVKPMIKTCDL-SEK 684
            .|......:.:|..||.:.         :.|:....::..:..| .|| |:||..:.:..| |.:
Mouse   400 LDTHLSGKEQLTFLAPLNS---------VFKDGVPRIDAQMKTL-LLN-HMVKEQLASKYLYSGQ 453

  Fly   685 SLPTVAGSSVRLNLYSTHALFSDVMNRATVNCARLVHFDDESCGSVLHQVDRALAPPKNNMLKLL 749
            :|.|:.|..:|:.:|         .|...:..:.:...|.......|..:||.|.||...::.:|
Mouse   454 TLDTLGGKKLRVFVY---------RNSLCIENSCIAAHDKRGRFGTLFTMDRMLTPPMGTVMDVL 509

  Fly   750 EANPNYSKFLELVRKANLTQLLSNDSRSLTLLVPKNDIF-----EELNESGEGSKPADPMALVKT 809
            :.:..:|..:..::.|.|.::|:.:. ..|:..|.|:.|     ||||:....:|  :...::|.
Mouse   510 KGDNRFSMLVAAIQSAGLMEILNREG-VYTVFAPTNEAFQAMPPEELNKLLANAK--ELTNILKY 571

  Fly   810 HIVEDVVCCAGIIPTNWPFVRSIESISGQHLRI-TRDRRPKIENAGVTKCDVVATNGILHEINDI 873
            ||.::::...||    ...|| ::|:.|..|.: :::....:....|.:.|::||||:::.||.:
Mouse   572 HIGDEILVSGGI----GALVR-LKSLQGDKLEVSSKNNVVSVNKEPVAETDIMATNGVVYAINTV 631

  Fly   874 IVPRPQRQQQQRPQL 888
            :.|...|.|::..:|
Mouse   632 LQPPANRPQERGDEL 646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mfasNP_788655.1 FAS1 339..450 CDD:214719 23/114 (20%)
Fasciclin 462..592 CDD:280607 39/132 (30%)
Fasciclin 607..740 CDD:280607 26/133 (20%)
Fasciclin 753..875 CDD:280607 31/127 (24%)
TgfbiNP_033395.1 Fasciclin 133..236 CDD:280607 25/120 (21%)
Fasciclin 253..373 CDD:280607 40/132 (30%)
Fasciclin 386..500 CDD:280607 26/133 (20%)
Fasciclin 514..634 CDD:280607 31/127 (24%)
Cell attachment site. /evidence=ECO:0000255 642..644 0/1 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841928
Domainoid 1 1.000 54 0.196 Domainoid score I11151
eggNOG 1 0.900 - - E1_COG2335
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H37294
Inparanoid 1 1.050 146 1.000 Inparanoid score I4401
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D395206at33208
OrthoFinder 1 1.000 - - FOG0002089
OrthoInspector 1 1.000 - - otm42947
orthoMCL 1 0.900 - - OOG6_100594
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1830
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.690

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