DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3397 and kcnab3

DIOPT Version :10

Sequence 1:NP_650140.1 Gene:CG3397 / 41454 FlyBaseID:FBgn0037975 Length:342 Species:Drosophila melanogaster
Sequence 2:NP_001072370.1 Gene:kcnab3 / 779823 XenbaseID:XB-GENE-996883 Length:401 Species:Xenopus tropicalis


Alignment Length:349 Identity:90/349 - (25%)
Similarity:150/349 - (42%) Gaps:70/349 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 KVRRMEYRQLGSTGLRVSKIALG-GATLSKLFSDDFDREEGILTVQEAIRSGINYIDTAPFYGQG 81
            |...|:||.||.:|||||.:.|| ..|.....||:.  .|.::||  |...|||..|||..|..|
 Frog    67 KATGMKYRNLGKSGLRVSCLGLGTWVTFGSQISDEV--AENLMTV--AYEHGINLFDTAEVYAAG 127

  Fly    82 KSEELLGQAL--KDVPREAYYIATKVARYELDPNNMFDYTAAKAR-----------ESVKRSLEL 133
            ::|..||:.|  |:..|.:|.:.||:            |...:|.           |.::.|||.
 Frog   128 RAERTLGKILKKKEWRRSSYVVTTKI------------YWGGQAETERGLSRKHIIEGLRGSLER 180

  Fly   134 LQLDRVDVLQVHDVDAAPSLDMVLNETIPVLEEYVQAGKARFIGVTAYDVDVLKEC--AERGKGR 196
            ||||.||::..:.:|  |:..|  .|.:..:...:..|.|.:.|.:.:....:.|.  ..|....
 Frog   181 LQLDYVDIVFANRMD--PNSPM--EEIVRAMTFVINQGMAMYWGTSRWSAMEIMEAYSVARQFNL 241

  Fly   197 IQVVLNYARYTLLDNTLLR-HM-KAFQEMGVGVVCAAAHSLGLL-----------SNAGPQSWHP 248
            |..|...|.|.|.....:. |: :.:.::|||.:..:..:.||:           |.|..:.:|.
 Frog   242 IPPVCEQAEYHLFQREKVETHLPELYHKIGVGSMTWSPLACGLITGKYADSVPEKSRASFKGYHW 306

  Fly   249 GSPELLAVGKRGAE----------ICQKRNVELGKLAMYYTMQLDGAATFLIGIPNRKLLRINLD 303
            ...:  |:...|.:          |..:.|..:.:||:.:.::.:|.::.|:|:.:...|..||.
 Frog   307 LKEK--AISDEGKKQHSKVKELHPIADRLNCTVAQLAIAWCLRSEGVSSVLLGVSSSDQLLENLG 369

  Fly   304 AIFDGLTSHEQEVLQYLRENVFTK 327
            ||         :||.:|...:.|:
 Frog   370 AI---------QVLPHLTPQLVTE 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3397NP_650140.1 AKR_galDH 22..315 CDD:381389 85/331 (26%)
kcnab3NP_001072370.1 AKR_SF 69..393 CDD:444925 89/347 (26%)

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