DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3397 and kcnab2b

DIOPT Version :10

Sequence 1:NP_650140.1 Gene:CG3397 / 41454 FlyBaseID:FBgn0037975 Length:342 Species:Drosophila melanogaster
Sequence 2:XP_005162233.1 Gene:kcnab2b / 565014 ZFINID:ZDB-GENE-080219-36 Length:469 Species:Danio rerio


Alignment Length:369 Identity:86/369 - (23%)
Similarity:144/369 - (39%) Gaps:89/369 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 MEYRQLGSTGLRVSKIALG-GATLSKLFSDDFDREEGILTVQEAIRSGINYIDTAPFYGQGKSEE 85
            |.||.||.:|||||.:.|| ..|.....:|:.  .|.::|:  |..:|||..|||..|..||:|.
Zfish   124 MRYRNLGKSGLRVSCLGLGTWVTFGGQITDEI--AEQLMTL--AYENGINLFDTAEVYAAGKAEM 184

  Fly    86 LLGQALKDV--PREAYYIATKVARYELDPNNMFDYTAAKAR-----------ESVKRSLELLQLD 137
            :||..:|..  .|.:..|.||:            |...||.           |.::.|||.|||:
Zfish   185 VLGSIIKKKGWRRSSLVITTKI------------YWGGKAETERGLSRKHIIEGLRASLERLQLE 237

  Fly   138 RVDVLQVHDVD-----------AAPSLDMVLNETIPVLEEYVQAGKARFIGVTAYDVDVLKEC-- 189
            .|||:..:..|           .:.|...::.||:..:...:..|.|.:.|.:.:....:.|.  
Zfish   238 YVDVVFANRPDPNTPMEGDPFNTSKSRTFIIEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYS 302

  Fly   190 AERGKGRIQVVLNYARYTLL--DNTLLRHMKAFQEMGVGVVCAAAHSLGLLSNAGPQSWHPGSPE 252
            ..|....|..|...|.|.:.  :...::..:.|.::|||.:..:..:.|::|.    .:..|.|.
Zfish   303 VARQFNLIPPVCEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIISG----KYDSGVPP 363

  Fly   253 LLAVGKRGAE-----------------------ICQKRNVELGKLAMYYTMQLDGAATFLIGIPN 294
            ......:|.:                       |.::....|.:||:.:.::.:|.:..|:|..:
Zfish   364 CSRASLKGYQWMKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSCVLLGASS 428

  Fly   295 RKLLRINLDAIFDGLTSHEQEVLQYLRENVF--------TKSYS 330
            ...|..|:.||         :||..|..::.        .|.||
Zfish   429 TDQLMENIGAI---------QVLPKLSSSIIHEVDSILGNKPYS 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3397NP_650140.1 AKR_galDH 22..315 CDD:381389 80/344 (23%)
kcnab2bXP_005162233.1 Aldo_ket_red_shaker 125..449 CDD:381367 82/352 (23%)

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