DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3397 and kcnab2

DIOPT Version :10

Sequence 1:NP_650140.1 Gene:CG3397 / 41454 FlyBaseID:FBgn0037975 Length:342 Species:Drosophila melanogaster
Sequence 2:XP_017950940.2 Gene:kcnab2 / 100486636 XenbaseID:XB-GENE-990281 Length:455 Species:Xenopus tropicalis


Alignment Length:369 Identity:87/369 - (23%)
Similarity:147/369 - (39%) Gaps:89/369 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 MEYRQLGSTGLRVSKIALG-GATLSKLFSDDFDREEGILTVQEAIRSGINYIDTAPFYGQGKSEE 85
            |:||.||.:|||||.:.|| ..|.....:|:.  .|.::|:  |..:|||..|||..|..||:|.
 Frog   110 MKYRNLGKSGLRVSCLGLGTWVTFGGQITDEM--AEQLMTL--AYDNGINLFDTAEVYAAGKAEV 170

  Fly    86 LLGQALKDV--PREAYYIATKVARYELDPNNMFDYTAAKAR-----------ESVKRSLELLQLD 137
            :||..:|..  .|.:..|.||:            :...||.           |.:|.|||.||||
 Frog   171 VLGNIIKKKGWRRSSLVITTKI------------FWGGKAETERGLSRKHIIEGLKASLERLQLD 223

  Fly   138 RVDVLQVHDVD-----------AAPSLDMVLNETIPVLEEYVQAGKARFIGVTAYDVDVLKEC-- 189
            .|||:..:..|           ::.|...::.||:..:...:..|.|.:.|.:.:....:.|.  
 Frog   224 YVDVVFANRPDPNTPMEGDPFSSSKSRTFIIEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYS 288

  Fly   190 AERGKGRIQVVLNYARYTLL--DNTLLRHMKAFQEMGVGVVCAAAHSLGLLSNAGPQSWHPGSPE 252
            ..|....|..:...|.|.:.  :...::..:.|.::|||.:..:..:.|::|.    .:..|.|.
 Frog   289 VARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSG----KYDGGIPP 349

  Fly   253 LLAVGKRGAE-----------------------ICQKRNVELGKLAMYYTMQLDGAATFLIGIPN 294
            ......:|.:                       |.::....|.:||:.:.::.:|.::.|:|..|
 Frog   350 YSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASN 414

  Fly   295 RKLLRINLDAIFDGLTSHEQEVLQYLRENVF--------TKSYS 330
            ...|..|:.||         :||..|..::.        .|.||
 Frog   415 ADQLLENIGAI---------QVLPKLSSSIIHEIDSILGNKPYS 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3397NP_650140.1 AKR_galDH 22..315 CDD:381389 81/344 (24%)
kcnab2XP_017950940.2 Aldo_ket_red_shaker 111..435 CDD:381367 83/352 (24%)

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