DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12224 and Kcnab2

DIOPT Version :9

Sequence 1:NP_650139.3 Gene:CG12224 / 41453 FlyBaseID:FBgn0037974 Length:338 Species:Drosophila melanogaster
Sequence 2:XP_011248499.1 Gene:Kcnab2 / 16498 MGIID:109239 Length:414 Species:Mus musculus


Alignment Length:368 Identity:90/368 - (24%)
Similarity:154/368 - (41%) Gaps:90/368 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 MEYRQLGSTGLHVSKLAIG-----GSPLCNLFFDDYDREEGILMVQEAIRSGINYIDTAPFL--- 78
            |:||.||.:||.||.|.:|     |..:.:      :..|.::.:  |..:|||..|||...   
Mouse    68 MKYRNLGKSGLRVSCLGLGTWVTFGGQITD------EMAEHLMTL--AYDNGINLFDTAEVYAAG 124

  Fly    79 -SEVLLGQALKDV--PREAYYIATKV-------ARYGLDPKNMFDYSADKARESVKRSLERLQLD 133
             :||:||..:|..  .|.:..|.||:       ...||..|::.        |.:|.|||||||:
Mouse   125 KAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHII--------EGLKASLERLQLE 181

  Fly   134 RVDILQVHDVDAAPNLDI--------------VLNETIPVLEEYVQAGKARFIGVTAYDVDVLKE 184
            .||::..:..|  ||..:              ::.||:..:...:..|.|.:.|.:.:....:.|
Mouse   182 YVDVVFANRPD--PNTPMEAGDPFSSFKSRTFIIEETVRAMTHVINQGMAMYWGTSRWSSMEIME 244

  Fly   185 C--AERGKGRIQVVLNYARYTLL--DNTLLRYMKDFQKMGVGVVCAAAHSLGLLR---NAG--PH 240
            .  ..|....|..:...|.|.:.  :...::..:.|.|:|||.:..:..:.|::.   ::|  |:
Mouse   245 AYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSGIPPY 309

  Fly   241 --ASHPGSQ----EIL--------AVAKRGAEICQQRNVELGKLAMYYTMQLDGAATFLIGIPNR 291
              ||..|.|    :||        |..|....|.::....|.:||:.:.::.:|.::.|:|..|.
Mouse   310 SRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNA 374

  Fly   292 KLLRINLDAIFDGLTSHEQEVLQYLRENVF--------TKSYS 326
            :.|..|:.||         :||..|..::.        .|.||
Mouse   375 EQLMENIGAI---------QVLPKLSSSIVHEIDSILGNKPYS 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12224NP_650139.3 AKR_galDH 22..311 CDD:381389 84/343 (24%)
Kcnab2XP_011248499.1 Aldo_ket_red_shaker 69..394 CDD:381367 86/351 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 72 1.000 Inparanoid score I5281
Isobase 1 0.950 - 0.985475 Normalized mean entropy S2698
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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