DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12224 and Kcnab1

DIOPT Version :9

Sequence 1:NP_650139.3 Gene:CG12224 / 41453 FlyBaseID:FBgn0037974 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_001344287.1 Gene:Kcnab1 / 16497 MGIID:109155 Length:419 Species:Mus musculus


Alignment Length:354 Identity:83/354 - (23%)
Similarity:148/354 - (41%) Gaps:64/354 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 HDEEKVRRMEYRQLGSTGLHVSKLAIG-----GSPLCNLFFDDYDREEGILMVQEAIRSGINYID 73
            |.......|.:|.||.:||.||.|.:|     |..:.:      :..|.::.:  |..||:|..|
Mouse    81 HTTAHTTGMPHRNLGKSGLRVSCLGLGTWVTFGGQISD------EVAERLMTI--AYESGVNLFD 137

  Fly    74 TAPFL----SEVLLGQALKDV--PREAYYIATKV-------ARYGLDPKNMFDYSADKARESVKR 125
            ||...    :||:||..:|..  .|.:..|.||:       ...||..|::.        |.:|.
Mouse   138 TAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHII--------EGLKG 194

  Fly   126 SLERLQLDRVDILQVHDVDAAPNLDIVLNETIPVLEEYVQAGKARFIGVTAYDVDVLKEC--AER 188
            ||:||||:.||::..:    .|:.:..:.|.:..:...:..|.|.:.|.:.:....:.|.  ..|
Mouse   195 SLQRLQLEYVDVVFAN----RPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVAR 255

  Fly   189 GKGRIQVVLNYARYTLL--DNTLLRYMKDFQKMGVGVVCAAAHSLGLLR----NAGPHASHPG-- 245
            ....|..|...|.|.|.  :...::..:.:.|:|||.:..:..:.|::.    |..|.:|...  
Mouse   256 QFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKYGNGVPESSRASLK 320

  Fly   246 -----SQEILAVAKRGAE--------ICQQRNVELGKLAMYYTMQLDGAATFLIGIPNRKLLRIN 297
                 .:.|::...|..:        |.::....|.:||:.:.::.:|.::.|:|....:.|..|
Mouse   321 CYQWLKERIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIEN 385

  Fly   298 LDAI--FDGLTSH-EQEVLQYLRENVFTK 323
            |.||  ...:||| ..|:...||...::|
Mouse   386 LGAIQVLPKMTSHVVNEIDNILRNKPYSK 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12224NP_650139.3 AKR_galDH 22..311 CDD:381389 78/332 (23%)
Kcnab1NP_001344287.1 Kv_beta 91..407 CDD:213602 78/335 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 72 1.000 Inparanoid score I5281
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

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