DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18547 and kcnab3

DIOPT Version :10

Sequence 1:NP_650138.1 Gene:CG18547 / 41452 FlyBaseID:FBgn0037973 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_001072370.1 Gene:kcnab3 / 779823 XenbaseID:XB-GENE-996883 Length:401 Species:Xenopus tropicalis


Alignment Length:369 Identity:99/369 - (26%)
Similarity:155/369 - (42%) Gaps:63/369 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SQTLPATYVKGFHDEAKVRRMEYRNLGKTGLQVS------KVSFGGGALCANYGFDLEEGIKTVH 60
            ||.||...........|...|:||||||:||:||      .|:||     :....::.|.:.|| 
 Frog    51 SQVLPLLSHILRESTVKATGMKYRNLGKSGLRVSCLGLGTWVTFG-----SQISDEVAENLMTV- 109

  Fly    61 EAVKSGINYIDTAPWYGQGRSEEVLG--LALKDVPRESYYIATKV---ARYELDYDKMFDFSAKK 120
             |.:.|||..|||..|..||:|..||  |..|:..|.||.:.||:   .:.|.:.    ..|.|.
 Frog   110 -AYEHGINLFDTAEVYAAGRAERTLGKILKKKEWRRSSYVVTTKIYWGGQAETER----GLSRKH 169

  Fly   121 TRESVEKSLKLLGLDYVDVIQIHDIEFAKDLD--IVINETLPTLEQLVKEGKARFIGVSAYPISV 183
            ..|.:..||:.|.|||||::      ||..:|  ..:.|.:..:..::.:|.|.:.|.|.:....
 Frog   170 IIEGLRGSLERLQLDYVDIV------FANRMDPNSPMEEIVRAMTFVINQGMAMYWGTSRWSAME 228

  Fly   184 LKE--FLTRTAGRLDTVLTYARYTLTDETLLE-YL-DFFKSQNLGVICAAAHALGLLT------- 237
            :.|  .:.|....:..|...|.|.|.....:| :| :.:....:|.:..:..|.||:|       
 Frog   229 IMEAYSVARQFNLIPPVCEQAEYHLFQREKVETHLPELYHKIGVGSMTWSPLACGLITGKYADSV 293

  Fly   238 ----NAGPQPWH-----PASDEQKAIARKASE---VCKERGVELGKLAMYYTMSGLPEVSTFLTG 290
                .|..:.:|     ..|||.|....|..|   :.......:.:||:.:.:.. ..||:.|.|
 Frog   294 PEKSRASFKGYHWLKEKAISDEGKKQHSKVKELHPIADRLNCTVAQLAIAWCLRS-EGVSSVLLG 357

  Fly   291 MQTRQLLRINLDANEVGLSDKEQEVLRYLKENVLTKPFDWEGNE 334
            :.:...|..||.|         .:||.:|...::|:.....||:
 Frog   358 VSSSDQLLENLGA---------IQVLPHLTPQLVTEIDQILGNK 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18547NP_650138.1 AKR_galDH 22..314 CDD:381389 88/327 (27%)
kcnab3NP_001072370.1 AKR_SF 69..393 CDD:444925 94/351 (27%)

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