DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tango9 and Slc35a5

DIOPT Version :10

Sequence 1:NP_650136.1 Gene:Tango9 / 41450 FlyBaseID:FBgn0260744 Length:381 Species:Drosophila melanogaster
Sequence 2:XP_006248404.1 Gene:Slc35a5 / 498081 RGDID:1564361 Length:454 Species:Rattus norvegicus


Alignment Length:391 Identity:75/391 - (19%)
Similarity:137/391 - (35%) Gaps:135/391 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LSLIFVLSGTFNVLVVKW-ANQQQVIGSDGKLHGFQHPVVFTLLMFLGE----FLCFAV------ 60
            |.:||:...:..:|:||: ||::.           ::..:.|.:....|    .||..|      
  Rat    51 LGVIFITLSSSRILLVKYSANEEN-----------KYDYLPTTVNVCSELMKLILCILVSLCIVK 104

  Fly    61 -----FKVIRLISNRR----------GVISDLDSILSQDSSEFRPVSMLLPTLLDAAASILLFTG 110
                 .|.:|..|.:.          ..:..||:::     .|..:|.|.|     |.:::....
  Rat   105 KEDHQSKHVRCTSWKEFSGFLKWSIPAFLYFLDNLI-----VFYVLSYLQP-----AMAVIFSNF 159

  Fly   111 LYLTYATSFQM--------IRGAAL--IFVGIF----STMFLNHTLTGR--HWLAIFTIS----- 154
            ..:|.|..|::        |:.|:|  :|:.|.    ||....|.|.|.  |..|.||.|     
  Rat   160 SIITTALLFRIVLKRHLNWIQWASLLILFLSIVALTASTKTSQHDLAGHGFHHDAFFTPSNSCLH 224

  Fly   155 ----CGLLDIISLDVHRVEYDLVTLPYTDYKSILT------GDLLIIIAEILHGLQYVCEEKQLK 209
                |.|.|    :....|:....:.:.....:.:      |.:|||:...:..:..:..||.||
  Rat   225 FRRDCSLGD----NCTSKEWAFSDVQWNSTARVFSHIRLGLGHVLIIVQCFISSMANIYNEKILK 285

  Fly   210 -------------------------------TSNVAPLQAAGWQGIFGLGITSMLAICMNFLPSI 243
                                           :||...:|..|:  .:|....|::.|   |:.:.
  Rat   286 EGTQHTESIFIQNSKLYFFGIVFNGLTLVLQSSNRDQIQNCGF--FYGHNAFSVVLI---FVTAF 345

  Fly   244 DPFSCSSRAVFDDWGDLFAALQGSISLIMTLIAFTISCAMYNF------------IGLYIAMYSS 296
            ...|.:....|.|  ::|..|...::   |:|..|:|..:::|            :.|.|.:|::
  Rat   346 QGLSVAFILKFLD--NMFHVLMAQVT---TVIITTVSVLVFDFRPSLDFFLEAPSVLLSIFIYNA 405

  Fly   297 S 297
            |
  Rat   406 S 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tango9NP_650136.1 None
Slc35a5XP_006248404.1 Nuc_sug_transp 53..404 CDD:398009 72/385 (19%)

Return to query results.
Submit another query.