DRSC/TRiP Functional Genomics Resources

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Protein Alignment MATK and shd1

DIOPT Version :10

Sequence 1:NP_002369.2 Gene:MATK / 4145 HGNCID:6906 Length:508 Species:Homo sapiens
Sequence 2:NP_594213.1 Gene:shd1 / 2542338 PomBaseID:SPAC16E8.01 Length:1420 Species:Schizosaccharomyces pombe


Alignment Length:243 Identity:51/243 - (20%)
Similarity:86/243 - (35%) Gaps:60/243 - (24%)


- Green bases have known domain annotations that are detailed below.


Human   275 LDETAVMTKMQHENLVRLLGVILHQGLYI-VMEHVSKGNLVNFLRTRGRALVNTAQLLQFSLHVA 338
            |||..:.:  .:.:.:|.||  |.:|..| ||.||   |.:|.:.|:..:.:..           
pombe   824 LDEACIPS--LNPDTLRTLG--LKEGDIIRVMNHV---NELNGVSTKPASAITP----------- 870

Human   339 EGMEYLESKKLVHR-----DLAARNILVSEDLVAKVSDFGLAKAERKGLDSSRLPVKWTAPEALK 398
                  |:|..|::     :..|..:.|...:.|.|::.....|..|.:.........|.|::..
pombe   871 ------ETKSTVNQIMSGGEALAAPVAVPAPIPAPVAEPAPPAAPAKEVVEKAPSPPATRPKSTT 929

Human   399 HGKFTSKSDVWSFGVLLWEVFSYGRAPYPKMSLKEVSEAVEKGYRMEPPEGCPGPVHVLMSSCWE 463
            ..||  ..|.|:            ..|..:..::..|..||           |..|...|:....
pombe   930 PQKF--DDDAWA------------NKPVTEPPVRASSVTVE-----------PARVTESMNKMNI 969

Human   464 AEPARRP--PFRKLAEKLARELRSAGAPASVSGQDADGST-SPRSQEP 508
            :|.|::|  |.|.....:........||  |..:||:.|. :|...:|
pombe   970 SEEAKKPEAPSRPRTAPIPEPEEQKKAP--VEKKDAEKSVQAPIPAQP 1015

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MATKNP_002369.2 SH3_CHK 51..109 CDD:212745
SH3 domain 55..106
SH2_csk_like 119..216 CDD:198190
SH2 domain 123..213
PTKc_Chk 229..482 CDD:270666 43/214 (20%)
catalytic domain 236..479 43/211 (20%)
shd1NP_594213.1 SH3_Sla1p_1 9..75 CDD:212707
SH3_Sla1p_2 84..134 CDD:212708
SH3_Sla1p_3 511..565 CDD:212709
SHD1 641..706 CDD:427630
SAM_SLA1_fungal 796..857 CDD:188931 14/39 (36%)
PRK10263 <918..>1068 CDD:236669 26/125 (21%)
Med15 1004..>1407 CDD:312941 3/12 (25%)
DUF1720 1044..1117 CDD:369766
DUF1720 1140..1221 CDD:369766
Blue background indicates that the domain is not in the aligned region.

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