DRSC/TRiP Functional Genomics Resources

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Protein Alignment GC2 and AGC1

DIOPT Version :9

Sequence 1:NP_731657.2 Gene:GC2 / 41449 FlyBaseID:FBgn0037970 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_015346.1 Gene:AGC1 / 856132 SGDID:S000006225 Length:902 Species:Saccharomyces cerevisiae


Alignment Length:327 Identity:117/327 - (35%)
Similarity:169/327 - (51%) Gaps:38/327 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLEQVE-QKNQEQK---KPQKFNVFPKIIN---GGVAGIIGVACVYPLDMVKTRLQNQTIGPNGE 58
            ::.|:| ||||.:.   ....:.:|..:.|   |.:||.||...|||:|.:|||:|.|    ...
Yeast   504 LVHQMELQKNQNESLYINYYFYPIFDSLYNFSLGSIAGCIGATVVYPIDFIKTRMQAQ----RSL 564

  Fly    59 RMYTSIADCFRKTIASEGYFGMYRGSAVNIVLITPEKAIKLTANDFFRYHLASDDGVIPLSRATL 123
            ..|.:..||..|.|:.||..|:|.|....::.:.||||||||.|||.|..|...:|.:.|....:
Yeast   565 AQYKNSIDCLLKIISREGIKGLYSGLGPQLIGVAPEKAIKLTVNDFMRNRLTDKNGKLSLFPEII 629

  Fly   124 AGGLAGLFQIVVTTPMELLKIQMQDAGRVAAADRAAGREVKTITALGLTKTLLRERGIFGLYKGV 188
            :|..||..|::.|.|:|::||::|........:.....|..|        .::::.|:.|||.||
Yeast   630 SGASAGACQVIFTNPLEIVKIRLQVQSDYVGENIQQANETAT--------QIVKKLGLRGLYNGV 686

  Fly   189 GATGVRDITFSMVYFPLMAWI---------NDQGPRKSDGSGEAVFYWSLI-AGLLSGMTSAFMV 243
            .|..:||:.||.:|||..|.:         ||:..|      ..:..|.|: ||.::||.:||:.
Yeast   687 AACLMRDVPFSAIYFPTYAHLKKDLFDFDPNDKTKR------NRLKTWELLTAGAIAGMPAAFLT 745

  Fly   244 TPFDVVKTRLQAD---GEKKFKGIMDCVNRTLKEEGISAFFKGGLCRIMVLAPLFGIAQMFYFLG 305
            |||||:|||||.|   ||.|:.||...:...||||...:|||||..|::..:|.||.....|.|.
Yeast   746 TPFDVIKTRLQIDPRKGETKYNGIFHAIRTILKEESFRSFFKGGGARVLRSSPQFGFTLAAYELF 810

  Fly   306 VG 307
            .|
Yeast   811 KG 812

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GC2NP_731657.2 PTZ00169 14..289 CDD:240302 105/290 (36%)
Mito_carr 16..106 CDD:278578 37/92 (40%)
Mito_carr 123..203 CDD:278578 23/79 (29%)
Mito_carr 228..302 CDD:278578 36/77 (47%)
AGC1NP_015346.1 Mito_carr 531..619 CDD:395101 38/91 (42%)
Mito_carr 620..713 CDD:395101 29/100 (29%)
Mito_carr 723..814 CDD:395101 40/90 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
21.870

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